Protein–RNA interactions for Protein: Q96GD3

SCMH1, Polycomb protein SCMH1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1Q96GD3 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SCMH1Q96GD3 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
SCMH1Q96GD3 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.54■□□□□ 0.72
SCMH1Q96GD3 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
SCMH1Q96GD3 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.54■□□□□ 0.72
SCMH1Q96GD3 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.54■□□□□ 0.72
SCMH1Q96GD3 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.54■□□□□ 0.72
SCMH1Q96GD3 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.54■□□□□ 0.72
SCMH1Q96GD3 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.54■□□□□ 0.72
SCMH1Q96GD3 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.54■□□□□ 0.72
SCMH1Q96GD3 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SCMH1Q96GD3 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SCMH1Q96GD3 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SCMH1Q96GD3 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SCMH1Q96GD3 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SCMH1Q96GD3 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SCMH1Q96GD3 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SCMH1Q96GD3 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
SCMH1Q96GD3 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.54■□□□□ 0.72
SCMH1Q96GD3 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
SCMH1Q96GD3 AC087742.1-201ENST00000575880 1738 ntBASIC19.54■□□□□ 0.72
SCMH1Q96GD3 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.53■□□□□ 0.72
SCMH1Q96GD3 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SCMH1Q96GD3 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
SCMH1Q96GD3 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SCMH1Q96GD3 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SCMH1Q96GD3 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SCMH1Q96GD3 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
SCMH1Q96GD3 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SCMH1Q96GD3 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.53■□□□□ 0.72
SCMH1Q96GD3 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SCMH1Q96GD3 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SCMH1Q96GD3 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SCMH1Q96GD3 AC010141.2-201ENST00000452426 721 ntBASIC19.53■□□□□ 0.72
SCMH1Q96GD3 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.53■□□□□ 0.72
SCMH1Q96GD3 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SCMH1Q96GD3 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.53■□□□□ 0.72
SCMH1Q96GD3 AC138907.5-202ENST00000569484 235 ntBASIC19.53■□□□□ 0.72
SCMH1Q96GD3 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SCMH1Q96GD3 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.53■□□□□ 0.72
SCMH1Q96GD3 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.53■□□□□ 0.72
SCMH1Q96GD3 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SCMH1Q96GD3 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SCMH1Q96GD3 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.52■□□□□ 0.72
SCMH1Q96GD3 AP006587.3-201ENST00000525742 1516 ntBASIC19.52■□□□□ 0.72
SCMH1Q96GD3 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SCMH1Q96GD3 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SCMH1Q96GD3 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.52■□□□□ 0.72
SCMH1Q96GD3 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
SCMH1Q96GD3 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SCMH1Q96GD3 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
SCMH1Q96GD3 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
SCMH1Q96GD3 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.52■□□□□ 0.72
SCMH1Q96GD3 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.52■□□□□ 0.72
SCMH1Q96GD3 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.52■□□□□ 0.72
SCMH1Q96GD3 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
SCMH1Q96GD3 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.52■□□□□ 0.72
SCMH1Q96GD3 MYCNOS-205ENST00000641950 531 ntBASIC19.52■□□□□ 0.72
SCMH1Q96GD3 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SCMH1Q96GD3 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SCMH1Q96GD3 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.52■□□□□ 0.71
SCMH1Q96GD3 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
SCMH1Q96GD3 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SCMH1Q96GD3 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SCMH1Q96GD3 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.51■□□□□ 0.71
SCMH1Q96GD3 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SCMH1Q96GD3 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
SCMH1Q96GD3 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SCMH1Q96GD3 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SCMH1Q96GD3 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SCMH1Q96GD3 MIR663A-201ENST00000385250 93 ntBASIC19.51■□□□□ 0.71
SCMH1Q96GD3 NCF1B-203ENST00000435988 1254 ntBASIC19.51■□□□□ 0.71
SCMH1Q96GD3 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.51■□□□□ 0.71
SCMH1Q96GD3 KRT18P20-201ENST00000548986 1279 ntBASIC19.51■□□□□ 0.71
SCMH1Q96GD3 DUX4L16-201ENST00000555130 1264 ntBASIC19.51■□□□□ 0.71
SCMH1Q96GD3 AC104771.1-201ENST00000603335 964 ntBASIC19.51■□□□□ 0.71
SCMH1Q96GD3 AC231657.2-201ENST00000624556 255 ntBASIC19.51■□□□□ 0.71
SCMH1Q96GD3 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.51■□□□□ 0.71
SCMH1Q96GD3 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
SCMH1Q96GD3 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
SCMH1Q96GD3 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SCMH1Q96GD3 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SCMH1Q96GD3 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SCMH1Q96GD3 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SCMH1Q96GD3 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SCMH1Q96GD3 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SCMH1Q96GD3 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SCMH1Q96GD3 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SCMH1Q96GD3 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
SCMH1Q96GD3 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SCMH1Q96GD3 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SCMH1Q96GD3 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SCMH1Q96GD3 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
SCMH1Q96GD3 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.5■□□□□ 0.71
SCMH1Q96GD3 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
SCMH1Q96GD3 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
SCMH1Q96GD3 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SCMH1Q96GD3 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
SCMH1Q96GD3 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SCMH1Q96GD3 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms