Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPB3Q92617 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC16.64■□□□□ 0.25
NPIPB3Q92617 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC16.64■□□□□ 0.25
NPIPB3Q92617 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPB3Q92617 MIR4466-201ENST00000606121 54 ntBASIC16.64■□□□□ 0.25
NPIPB3Q92617 AC136469.2-201ENST00000623944 1028 ntBASIC16.64■□□□□ 0.25
NPIPB3Q92617 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
NPIPB3Q92617 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPB3Q92617 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPB3Q92617 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC16.64■□□□□ 0.25
NPIPB3Q92617 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPB3Q92617 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC16.64■□□□□ 0.25
NPIPB3Q92617 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPB3Q92617 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPIPB3Q92617 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC16.64■□□□□ 0.25
NPIPB3Q92617 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NPIPB3Q92617 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NPIPB3Q92617 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
NPIPB3Q92617 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
NPIPB3Q92617 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC16.63■□□□□ 0.25
NPIPB3Q92617 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NPIPB3Q92617 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC16.63■□□□□ 0.25
NPIPB3Q92617 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NPIPB3Q92617 SLC47A1P1-202ENST00000449666 945 ntBASIC16.63■□□□□ 0.25
NPIPB3Q92617 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NPIPB3Q92617 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NPIPB3Q92617 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NPIPB3Q92617 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
NPIPB3Q92617 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NPIPB3Q92617 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC16.63■□□□□ 0.25
NPIPB3Q92617 SLC25A24-204ENST00000569674 2357 ntBASIC16.63■□□□□ 0.25
NPIPB3Q92617 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NPIPB3Q92617 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NPIPB3Q92617 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPIPB3Q92617 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPIPB3Q92617 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPIPB3Q92617 AL157384.1-201ENST00000445995 2473 ntBASIC16.62■□□□□ 0.25
NPIPB3Q92617 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NPIPB3Q92617 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPIPB3Q92617 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NPIPB3Q92617 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPIPB3Q92617 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NPIPB3Q92617 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPIPB3Q92617 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
NPIPB3Q92617 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NPIPB3Q92617 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC16.62■□□□□ 0.25
NPIPB3Q92617 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC16.62■□□□□ 0.25
NPIPB3Q92617 AC011298.3-201ENST00000615796 283 ntBASIC16.62■□□□□ 0.25
NPIPB3Q92617 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPIPB3Q92617 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
NPIPB3Q92617 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPIPB3Q92617 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NPIPB3Q92617 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPIPB3Q92617 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPIPB3Q92617 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPIPB3Q92617 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPIPB3Q92617 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC16.61■□□□□ 0.25
NPIPB3Q92617 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
NPIPB3Q92617 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
NPIPB3Q92617 SF1-220ENST00000626028 704 ntTSL 2 BASIC16.61■□□□□ 0.25
NPIPB3Q92617 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
NPIPB3Q92617 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NPIPB3Q92617 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC16.61■□□□□ 0.25
NPIPB3Q92617 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NPIPB3Q92617 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC16.61■□□□□ 0.25
NPIPB3Q92617 AL049796.1-201ENST00000565336 1766 ntBASIC16.61■□□□□ 0.25
NPIPB3Q92617 AC073130.3-201ENST00000624389 2278 ntBASIC16.61■□□□□ 0.25
NPIPB3Q92617 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
NPIPB3Q92617 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
NPIPB3Q92617 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC16.6■□□□□ 0.25
NPIPB3Q92617 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPIPB3Q92617 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPIPB3Q92617 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
NPIPB3Q92617 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC16.6■□□□□ 0.25
NPIPB3Q92617 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC16.6■□□□□ 0.25
NPIPB3Q92617 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
NPIPB3Q92617 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC16.6■□□□□ 0.25
NPIPB3Q92617 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
NPIPB3Q92617 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPIPB3Q92617 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC16.6■□□□□ 0.25
NPIPB3Q92617 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC16.6■□□□□ 0.25
NPIPB3Q92617 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPIPB3Q92617 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPIPB3Q92617 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC16.6■□□□□ 0.25
NPIPB3Q92617 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPIPB3Q92617 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NPIPB3Q92617 PARN-205ENST00000539279 1557 ntTSL 2 BASIC16.6■□□□□ 0.25
NPIPB3Q92617 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC16.59■□□□□ 0.25
NPIPB3Q92617 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC16.59■□□□□ 0.25
NPIPB3Q92617 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NPIPB3Q92617 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPIPB3Q92617 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC16.59■□□□□ 0.25
NPIPB3Q92617 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPIPB3Q92617 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
NPIPB3Q92617 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPIPB3Q92617 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
NPIPB3Q92617 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NPIPB3Q92617 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NPIPB3Q92617 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC16.59■□□□□ 0.25
NPIPB3Q92617 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms