Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HIPK4Q8NE63 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
HIPK4Q8NE63 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.43■□□□□ 0.86
HIPK4Q8NE63 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
HIPK4Q8NE63 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
HIPK4Q8NE63 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.43■□□□□ 0.86
HIPK4Q8NE63 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
HIPK4Q8NE63 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.43■□□□□ 0.86
HIPK4Q8NE63 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.43■□□□□ 0.86
HIPK4Q8NE63 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.43■□□□□ 0.86
HIPK4Q8NE63 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.43■□□□□ 0.86
HIPK4Q8NE63 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
HIPK4Q8NE63 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
HIPK4Q8NE63 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HIPK4Q8NE63 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.43■□□□□ 0.86
HIPK4Q8NE63 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
HIPK4Q8NE63 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
HIPK4Q8NE63 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
HIPK4Q8NE63 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HIPK4Q8NE63 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
HIPK4Q8NE63 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
HIPK4Q8NE63 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
HIPK4Q8NE63 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.42■□□□□ 0.86
HIPK4Q8NE63 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.42■□□□□ 0.86
HIPK4Q8NE63 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.42■□□□□ 0.86
HIPK4Q8NE63 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HIPK4Q8NE63 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
HIPK4Q8NE63 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HIPK4Q8NE63 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
HIPK4Q8NE63 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.42■□□□□ 0.86
HIPK4Q8NE63 C17orf82-201ENST00000623772 1530 ntBASIC20.42■□□□□ 0.86
HIPK4Q8NE63 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HIPK4Q8NE63 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HIPK4Q8NE63 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
HIPK4Q8NE63 AC010997.5-201ENST00000609182 354 ntBASIC20.41■□□□□ 0.86
HIPK4Q8NE63 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HIPK4Q8NE63 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HIPK4Q8NE63 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HIPK4Q8NE63 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
HIPK4Q8NE63 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
HIPK4Q8NE63 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
HIPK4Q8NE63 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HIPK4Q8NE63 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
HIPK4Q8NE63 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HIPK4Q8NE63 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
HIPK4Q8NE63 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
HIPK4Q8NE63 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
HIPK4Q8NE63 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
HIPK4Q8NE63 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HIPK4Q8NE63 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HIPK4Q8NE63 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.4■□□□□ 0.86
HIPK4Q8NE63 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.4■□□□□ 0.86
HIPK4Q8NE63 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.4■□□□□ 0.86
HIPK4Q8NE63 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
HIPK4Q8NE63 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.4■□□□□ 0.86
HIPK4Q8NE63 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HIPK4Q8NE63 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
HIPK4Q8NE63 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.4■□□□□ 0.86
HIPK4Q8NE63 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HIPK4Q8NE63 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HIPK4Q8NE63 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
HIPK4Q8NE63 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
HIPK4Q8NE63 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.39■□□□□ 0.86
HIPK4Q8NE63 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
HIPK4Q8NE63 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
HIPK4Q8NE63 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
HIPK4Q8NE63 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
HIPK4Q8NE63 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.39■□□□□ 0.86
HIPK4Q8NE63 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.39■□□□□ 0.85
HIPK4Q8NE63 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HIPK4Q8NE63 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HIPK4Q8NE63 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.39■□□□□ 0.85
HIPK4Q8NE63 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
HIPK4Q8NE63 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HIPK4Q8NE63 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.39■□□□□ 0.85
HIPK4Q8NE63 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
HIPK4Q8NE63 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
HIPK4Q8NE63 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
HIPK4Q8NE63 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
HIPK4Q8NE63 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.38■□□□□ 0.85
HIPK4Q8NE63 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HIPK4Q8NE63 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HIPK4Q8NE63 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HIPK4Q8NE63 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HIPK4Q8NE63 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HIPK4Q8NE63 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
HIPK4Q8NE63 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.38■□□□□ 0.85
HIPK4Q8NE63 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HIPK4Q8NE63 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
HIPK4Q8NE63 AC239859.2-201ENST00000444165 318 ntBASIC20.38■□□□□ 0.85
HIPK4Q8NE63 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HIPK4Q8NE63 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HIPK4Q8NE63 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HIPK4Q8NE63 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HIPK4Q8NE63 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.38■□□□□ 0.85
HIPK4Q8NE63 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HIPK4Q8NE63 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
HIPK4Q8NE63 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.37■□□□□ 0.85
HIPK4Q8NE63 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
HIPK4Q8NE63 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms