Protein–RNA interactions for Protein: Q8NCL8

TMEM116, Transmembrane protein 116, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116Q8NCL8 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM116Q8NCL8 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM116Q8NCL8 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC16.67■□□□□ 0.26
TMEM116Q8NCL8 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC16.67■□□□□ 0.26
TMEM116Q8NCL8 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM116Q8NCL8 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM116Q8NCL8 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM116Q8NCL8 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
TMEM116Q8NCL8 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM116Q8NCL8 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC16.67■□□□□ 0.26
TMEM116Q8NCL8 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC16.67■□□□□ 0.26
TMEM116Q8NCL8 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM116Q8NCL8 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM116Q8NCL8 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC16.67■□□□□ 0.26
TMEM116Q8NCL8 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM116Q8NCL8 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
TMEM116Q8NCL8 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
TMEM116Q8NCL8 MED17-221ENST00000639724 2317 ntTSL 5 BASIC16.67■□□□□ 0.26
TMEM116Q8NCL8 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM116Q8NCL8 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
TMEM116Q8NCL8 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TMEM116Q8NCL8 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TMEM116Q8NCL8 AP004607.7-201ENST00000527152 1677 ntBASIC16.66■□□□□ 0.26
TMEM116Q8NCL8 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC16.66■□□□□ 0.26
TMEM116Q8NCL8 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
TMEM116Q8NCL8 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM116Q8NCL8 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TMEM116Q8NCL8 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM116Q8NCL8 PTMA-205ENST00000410064 814 ntTSL 2 BASIC16.66■□□□□ 0.26
TMEM116Q8NCL8 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC16.66■□□□□ 0.26
TMEM116Q8NCL8 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM116Q8NCL8 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM116Q8NCL8 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TMEM116Q8NCL8 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM116Q8NCL8 AF106564.1-201ENST00000607058 2553 ntBASIC16.66■□□□□ 0.26
TMEM116Q8NCL8 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM116Q8NCL8 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC16.66■□□□□ 0.26
TMEM116Q8NCL8 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM116Q8NCL8 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM116Q8NCL8 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC16.65■□□□□ 0.26
TMEM116Q8NCL8 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM116Q8NCL8 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM116Q8NCL8 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM116Q8NCL8 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM116Q8NCL8 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC16.65■□□□□ 0.26
TMEM116Q8NCL8 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
TMEM116Q8NCL8 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM116Q8NCL8 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM116Q8NCL8 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TMEM116Q8NCL8 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM116Q8NCL8 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC16.65■□□□□ 0.26
TMEM116Q8NCL8 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TMEM116Q8NCL8 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TMEM116Q8NCL8 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM116Q8NCL8 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC16.65■□□□□ 0.26
TMEM116Q8NCL8 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC16.64■□□□□ 0.26
TMEM116Q8NCL8 AC003102.1-202ENST00000563394 1796 ntBASIC16.64■□□□□ 0.25
TMEM116Q8NCL8 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM116Q8NCL8 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM116Q8NCL8 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM116Q8NCL8 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM116Q8NCL8 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM116Q8NCL8 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM116Q8NCL8 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM116Q8NCL8 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM116Q8NCL8 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC16.64■□□□□ 0.25
TMEM116Q8NCL8 SLC47A1P1-202ENST00000449666 945 ntBASIC16.64■□□□□ 0.25
TMEM116Q8NCL8 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC16.64■□□□□ 0.25
TMEM116Q8NCL8 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC16.64■□□□□ 0.25
TMEM116Q8NCL8 AL136162.1-201ENST00000607711 1078 ntBASIC16.64■□□□□ 0.25
TMEM116Q8NCL8 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM116Q8NCL8 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM116Q8NCL8 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TMEM116Q8NCL8 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM116Q8NCL8 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC16.63■□□□□ 0.25
TMEM116Q8NCL8 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM116Q8NCL8 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM116Q8NCL8 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM116Q8NCL8 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM116Q8NCL8 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM116Q8NCL8 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM116Q8NCL8 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM116Q8NCL8 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC16.63■□□□□ 0.25
TMEM116Q8NCL8 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM116Q8NCL8 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
TMEM116Q8NCL8 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC16.63■□□□□ 0.25
TMEM116Q8NCL8 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM116Q8NCL8 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM116Q8NCL8 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM116Q8NCL8 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
TMEM116Q8NCL8 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM116Q8NCL8 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC16.63■□□□□ 0.25
TMEM116Q8NCL8 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TMEM116Q8NCL8 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC16.63■□□□□ 0.25
TMEM116Q8NCL8 DYM-203ENST00000442713 2147 ntTSL 2 BASIC16.63■□□□□ 0.25
TMEM116Q8NCL8 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC16.63■□□□□ 0.25
TMEM116Q8NCL8 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TMEM116Q8NCL8 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
TMEM116Q8NCL8 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM116Q8NCL8 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms