Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.56■■□□□ 1.04
SYNPOQ8N3V7 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.56■■□□□ 1.04
SYNPOQ8N3V7 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.56■■□□□ 1.04
SYNPOQ8N3V7 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SYNPOQ8N3V7 MYC-209ENST00000641252 345 ntBASIC21.56■■□□□ 1.04
SYNPOQ8N3V7 AP006294.2-201ENST00000641667 209 ntBASIC21.56■■□□□ 1.04
SYNPOQ8N3V7 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SYNPOQ8N3V7 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SYNPOQ8N3V7 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
SYNPOQ8N3V7 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SYNPOQ8N3V7 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SYNPOQ8N3V7 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SYNPOQ8N3V7 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SYNPOQ8N3V7 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.55■■□□□ 1.04
SYNPOQ8N3V7 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.55■■□□□ 1.04
SYNPOQ8N3V7 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.55■■□□□ 1.04
SYNPOQ8N3V7 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SYNPOQ8N3V7 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.55■■□□□ 1.04
SYNPOQ8N3V7 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SYNPOQ8N3V7 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SYNPOQ8N3V7 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SYNPOQ8N3V7 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
SYNPOQ8N3V7 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SYNPOQ8N3V7 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.55■■□□□ 1.04
SYNPOQ8N3V7 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
SYNPOQ8N3V7 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
SYNPOQ8N3V7 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SYNPOQ8N3V7 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
SYNPOQ8N3V7 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SYNPOQ8N3V7 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SYNPOQ8N3V7 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.54■■□□□ 1.04
SYNPOQ8N3V7 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC21.54■■□□□ 1.04
SYNPOQ8N3V7 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SYNPOQ8N3V7 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SYNPOQ8N3V7 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
SYNPOQ8N3V7 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
SYNPOQ8N3V7 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SYNPOQ8N3V7 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.54■■□□□ 1.04
SYNPOQ8N3V7 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SYNPOQ8N3V7 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.54■■□□□ 1.04
SYNPOQ8N3V7 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.54■■□□□ 1.04
SYNPOQ8N3V7 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SYNPOQ8N3V7 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SYNPOQ8N3V7 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
SYNPOQ8N3V7 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SYNPOQ8N3V7 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.53■■□□□ 1.04
SYNPOQ8N3V7 RARRES2P4-201ENST00000514074 484 ntBASIC21.53■■□□□ 1.04
SYNPOQ8N3V7 ADM-205ENST00000528544 586 ntTSL 2 BASIC21.53■■□□□ 1.04
SYNPOQ8N3V7 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.53■■□□□ 1.04
SYNPOQ8N3V7 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SYNPOQ8N3V7 AL591742.1-201ENST00000604433 565 ntBASIC21.53■■□□□ 1.04
SYNPOQ8N3V7 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SYNPOQ8N3V7 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
SYNPOQ8N3V7 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
SYNPOQ8N3V7 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SYNPOQ8N3V7 KRT16P2-201ENST00000414673 1423 ntBASIC21.53■■□□□ 1.04
SYNPOQ8N3V7 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
SYNPOQ8N3V7 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
SYNPOQ8N3V7 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SYNPOQ8N3V7 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SYNPOQ8N3V7 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
SYNPOQ8N3V7 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SYNPOQ8N3V7 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SYNPOQ8N3V7 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SYNPOQ8N3V7 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.52■■□□□ 1.04
SYNPOQ8N3V7 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.52■■□□□ 1.04
SYNPOQ8N3V7 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SYNPOQ8N3V7 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
SYNPOQ8N3V7 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.52■■□□□ 1.04
SYNPOQ8N3V7 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC21.52■■□□□ 1.04
SYNPOQ8N3V7 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.52■■□□□ 1.04
SYNPOQ8N3V7 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.52■■□□□ 1.04
SYNPOQ8N3V7 AC083880.1-201ENST00000608266 535 ntBASIC21.52■■□□□ 1.04
SYNPOQ8N3V7 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.52■■□□□ 1.04
SYNPOQ8N3V7 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SYNPOQ8N3V7 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SYNPOQ8N3V7 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.52■■□□□ 1.04
SYNPOQ8N3V7 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
SYNPOQ8N3V7 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
SYNPOQ8N3V7 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
SYNPOQ8N3V7 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
SYNPOQ8N3V7 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SYNPOQ8N3V7 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC21.51■■□□□ 1.03
SYNPOQ8N3V7 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC21.51■■□□□ 1.03
SYNPOQ8N3V7 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.51■■□□□ 1.03
SYNPOQ8N3V7 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.51■■□□□ 1.03
SYNPOQ8N3V7 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.51■■□□□ 1.03
SYNPOQ8N3V7 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC21.51■■□□□ 1.03
SYNPOQ8N3V7 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.51■■□□□ 1.03
SYNPOQ8N3V7 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.51■■□□□ 1.03
SYNPOQ8N3V7 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SYNPOQ8N3V7 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.51■■□□□ 1.03
SYNPOQ8N3V7 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SYNPOQ8N3V7 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SYNPOQ8N3V7 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SYNPOQ8N3V7 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SYNPOQ8N3V7 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SYNPOQ8N3V7 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.51■■□□□ 1.03
SYNPOQ8N3V7 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SYNPOQ8N3V7 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms