Protein–RNA interactions for Protein: Q7Z739

YTHDF3, YTH domain-containing family protein 3, humanhuman

Known RBP Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YTHDF3Q7Z739 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
YTHDF3Q7Z739 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
YTHDF3Q7Z739 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
YTHDF3Q7Z739 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.98■□□□□ 0.95
YTHDF3Q7Z739 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
YTHDF3Q7Z739 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.97■□□□□ 0.95
YTHDF3Q7Z739 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
YTHDF3Q7Z739 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.97■□□□□ 0.95
YTHDF3Q7Z739 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.97■□□□□ 0.95
YTHDF3Q7Z739 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.97■□□□□ 0.95
YTHDF3Q7Z739 AC131212.1-201ENST00000613771 668 ntBASIC20.97■□□□□ 0.95
YTHDF3Q7Z739 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
YTHDF3Q7Z739 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
YTHDF3Q7Z739 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.97■□□□□ 0.95
YTHDF3Q7Z739 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.97■□□□□ 0.95
YTHDF3Q7Z739 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
YTHDF3Q7Z739 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.97■□□□□ 0.95
YTHDF3Q7Z739 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.97■□□□□ 0.95
YTHDF3Q7Z739 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
YTHDF3Q7Z739 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
YTHDF3Q7Z739 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
YTHDF3Q7Z739 AC006128.1-201ENST00000624704 1661 ntBASIC20.96■□□□□ 0.95
YTHDF3Q7Z739 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
YTHDF3Q7Z739 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
YTHDF3Q7Z739 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
YTHDF3Q7Z739 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
YTHDF3Q7Z739 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.96■□□□□ 0.95
YTHDF3Q7Z739 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
YTHDF3Q7Z739 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.96■□□□□ 0.95
YTHDF3Q7Z739 AC019069.1-201ENST00000610008 1333 ntBASIC20.96■□□□□ 0.95
YTHDF3Q7Z739 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
YTHDF3Q7Z739 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
YTHDF3Q7Z739 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
YTHDF3Q7Z739 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
YTHDF3Q7Z739 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.95
YTHDF3Q7Z739 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
YTHDF3Q7Z739 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.95■□□□□ 0.94
YTHDF3Q7Z739 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
YTHDF3Q7Z739 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
YTHDF3Q7Z739 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
YTHDF3Q7Z739 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
YTHDF3Q7Z739 AC026471.1-201ENST00000564629 3026 ntBASIC20.95■□□□□ 0.94
YTHDF3Q7Z739 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.95■□□□□ 0.94
YTHDF3Q7Z739 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
YTHDF3Q7Z739 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
YTHDF3Q7Z739 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
YTHDF3Q7Z739 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
YTHDF3Q7Z739 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
YTHDF3Q7Z739 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
YTHDF3Q7Z739 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
YTHDF3Q7Z739 AC018755.3-202ENST00000596210 929 ntBASIC20.94■□□□□ 0.94
YTHDF3Q7Z739 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
YTHDF3Q7Z739 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.94■□□□□ 0.94
YTHDF3Q7Z739 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
YTHDF3Q7Z739 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
YTHDF3Q7Z739 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
YTHDF3Q7Z739 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
YTHDF3Q7Z739 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
YTHDF3Q7Z739 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
YTHDF3Q7Z739 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.93■□□□□ 0.94
YTHDF3Q7Z739 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
YTHDF3Q7Z739 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
YTHDF3Q7Z739 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
YTHDF3Q7Z739 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
YTHDF3Q7Z739 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
YTHDF3Q7Z739 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
YTHDF3Q7Z739 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.93■□□□□ 0.94
YTHDF3Q7Z739 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.93■□□□□ 0.94
YTHDF3Q7Z739 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.93■□□□□ 0.94
YTHDF3Q7Z739 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.93■□□□□ 0.94
YTHDF3Q7Z739 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
YTHDF3Q7Z739 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
YTHDF3Q7Z739 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
YTHDF3Q7Z739 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
YTHDF3Q7Z739 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.93■□□□□ 0.94
YTHDF3Q7Z739 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
YTHDF3Q7Z739 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
YTHDF3Q7Z739 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
YTHDF3Q7Z739 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
YTHDF3Q7Z739 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
YTHDF3Q7Z739 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
YTHDF3Q7Z739 TNXA-203ENST00000507684 2038 ntBASIC20.92■□□□□ 0.94
YTHDF3Q7Z739 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
YTHDF3Q7Z739 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
YTHDF3Q7Z739 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.92■□□□□ 0.94
YTHDF3Q7Z739 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.92■□□□□ 0.94
YTHDF3Q7Z739 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.92■□□□□ 0.94
YTHDF3Q7Z739 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.92■□□□□ 0.94
YTHDF3Q7Z739 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.92■□□□□ 0.94
YTHDF3Q7Z739 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
YTHDF3Q7Z739 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
YTHDF3Q7Z739 AC026471.6-201ENST00000622954 1905 ntBASIC20.92■□□□□ 0.94
YTHDF3Q7Z739 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
YTHDF3Q7Z739 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
YTHDF3Q7Z739 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
YTHDF3Q7Z739 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
YTHDF3Q7Z739 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.91■□□□□ 0.94
YTHDF3Q7Z739 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
YTHDF3Q7Z739 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
YTHDF3Q7Z739 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms