Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNFT1Q5M7Z0 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.11■□□□□ 0.65
RNFT1Q5M7Z0 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNFT1Q5M7Z0 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
RNFT1Q5M7Z0 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNFT1Q5M7Z0 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RNFT1Q5M7Z0 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNFT1Q5M7Z0 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.11■□□□□ 0.65
RNFT1Q5M7Z0 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.11■□□□□ 0.65
RNFT1Q5M7Z0 AC120498.10-201ENST00000621827 505 ntBASIC19.11■□□□□ 0.65
RNFT1Q5M7Z0 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.11■□□□□ 0.65
RNFT1Q5M7Z0 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.11■□□□□ 0.65
RNFT1Q5M7Z0 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.11■□□□□ 0.65
RNFT1Q5M7Z0 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
RNFT1Q5M7Z0 AC127496.7-201ENST00000625110 1798 ntBASIC19.11■□□□□ 0.65
RNFT1Q5M7Z0 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNFT1Q5M7Z0 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNFT1Q5M7Z0 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
RNFT1Q5M7Z0 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNFT1Q5M7Z0 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNFT1Q5M7Z0 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNFT1Q5M7Z0 AC069152.1-201ENST00000438030 544 ntBASIC19.1■□□□□ 0.65
RNFT1Q5M7Z0 AC093787.1-201ENST00000450396 207 ntBASIC19.1■□□□□ 0.65
RNFT1Q5M7Z0 KRT18P6-201ENST00000555540 1265 ntBASIC19.1■□□□□ 0.65
RNFT1Q5M7Z0 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.1■□□□□ 0.65
RNFT1Q5M7Z0 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.1■□□□□ 0.65
RNFT1Q5M7Z0 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
RNFT1Q5M7Z0 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.1■□□□□ 0.65
RNFT1Q5M7Z0 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNFT1Q5M7Z0 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.1■□□□□ 0.65
RNFT1Q5M7Z0 KRT16P2-201ENST00000414673 1423 ntBASIC19.09■□□□□ 0.65
RNFT1Q5M7Z0 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNFT1Q5M7Z0 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
RNFT1Q5M7Z0 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.09■□□□□ 0.65
RNFT1Q5M7Z0 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNFT1Q5M7Z0 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
RNFT1Q5M7Z0 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNFT1Q5M7Z0 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.09■□□□□ 0.65
RNFT1Q5M7Z0 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.09■□□□□ 0.65
RNFT1Q5M7Z0 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.09■□□□□ 0.65
RNFT1Q5M7Z0 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RNFT1Q5M7Z0 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RNFT1Q5M7Z0 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.09■□□□□ 0.65
RNFT1Q5M7Z0 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.09■□□□□ 0.65
RNFT1Q5M7Z0 AC016405.3-201ENST00000607710 860 ntBASIC19.09■□□□□ 0.65
RNFT1Q5M7Z0 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.09■□□□□ 0.65
RNFT1Q5M7Z0 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.09■□□□□ 0.65
RNFT1Q5M7Z0 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
RNFT1Q5M7Z0 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNFT1Q5M7Z0 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RNFT1Q5M7Z0 RBM17P2-201ENST00000616397 1405 ntBASIC19.08■□□□□ 0.65
RNFT1Q5M7Z0 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RNFT1Q5M7Z0 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
RNFT1Q5M7Z0 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RNFT1Q5M7Z0 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.65
RNFT1Q5M7Z0 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.08■□□□□ 0.65
RNFT1Q5M7Z0 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RNFT1Q5M7Z0 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RNFT1Q5M7Z0 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.08■□□□□ 0.64
RNFT1Q5M7Z0 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.08■□□□□ 0.64
RNFT1Q5M7Z0 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNFT1Q5M7Z0 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.08■□□□□ 0.64
RNFT1Q5M7Z0 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RNFT1Q5M7Z0 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RNFT1Q5M7Z0 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNFT1Q5M7Z0 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.07■□□□□ 0.64
RNFT1Q5M7Z0 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.07■□□□□ 0.64
RNFT1Q5M7Z0 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.07■□□□□ 0.64
RNFT1Q5M7Z0 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNFT1Q5M7Z0 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RNFT1Q5M7Z0 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNFT1Q5M7Z0 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNFT1Q5M7Z0 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.07■□□□□ 0.64
RNFT1Q5M7Z0 TSPY20P-201ENST00000450910 630 ntBASIC19.07■□□□□ 0.64
RNFT1Q5M7Z0 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RNFT1Q5M7Z0 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.07■□□□□ 0.64
RNFT1Q5M7Z0 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.07■□□□□ 0.64
RNFT1Q5M7Z0 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RNFT1Q5M7Z0 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.07■□□□□ 0.64
RNFT1Q5M7Z0 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNFT1Q5M7Z0 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
RNFT1Q5M7Z0 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNFT1Q5M7Z0 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.07■□□□□ 0.64
RNFT1Q5M7Z0 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RNFT1Q5M7Z0 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
RNFT1Q5M7Z0 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNFT1Q5M7Z0 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.07■□□□□ 0.64
RNFT1Q5M7Z0 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNFT1Q5M7Z0 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
RNFT1Q5M7Z0 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNFT1Q5M7Z0 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNFT1Q5M7Z0 MKRN4P-201ENST00000444706 1521 ntBASIC19.06■□□□□ 0.64
RNFT1Q5M7Z0 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNFT1Q5M7Z0 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
RNFT1Q5M7Z0 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
RNFT1Q5M7Z0 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.06■□□□□ 0.64
RNFT1Q5M7Z0 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNFT1Q5M7Z0 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNFT1Q5M7Z0 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
RNFT1Q5M7Z0 MIPEPP3-201ENST00000412105 444 ntBASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms