Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.34■□□□□ 0.53
SNAI3Q3KNW1 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.34■□□□□ 0.53
SNAI3Q3KNW1 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNAI3Q3KNW1 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.34■□□□□ 0.53
SNAI3Q3KNW1 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SNAI3Q3KNW1 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
SNAI3Q3KNW1 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SNAI3Q3KNW1 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNAI3Q3KNW1 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.34■□□□□ 0.53
SNAI3Q3KNW1 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.34■□□□□ 0.53
SNAI3Q3KNW1 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.34■□□□□ 0.53
SNAI3Q3KNW1 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.34■□□□□ 0.53
SNAI3Q3KNW1 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.34■□□□□ 0.53
SNAI3Q3KNW1 MIR6084-201ENST00000622012 110 ntBASIC18.34■□□□□ 0.53
SNAI3Q3KNW1 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SNAI3Q3KNW1 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNAI3Q3KNW1 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNAI3Q3KNW1 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNAI3Q3KNW1 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.33■□□□□ 0.53
SNAI3Q3KNW1 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
SNAI3Q3KNW1 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SNAI3Q3KNW1 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SNAI3Q3KNW1 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SNAI3Q3KNW1 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
SNAI3Q3KNW1 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
SNAI3Q3KNW1 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SNAI3Q3KNW1 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.33■□□□□ 0.53
SNAI3Q3KNW1 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNAI3Q3KNW1 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SNAI3Q3KNW1 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.33■□□□□ 0.52
SNAI3Q3KNW1 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.33■□□□□ 0.52
SNAI3Q3KNW1 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNAI3Q3KNW1 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNAI3Q3KNW1 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
SNAI3Q3KNW1 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNAI3Q3KNW1 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNAI3Q3KNW1 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNAI3Q3KNW1 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNAI3Q3KNW1 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNAI3Q3KNW1 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.32■□□□□ 0.52
SNAI3Q3KNW1 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNAI3Q3KNW1 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNAI3Q3KNW1 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.32■□□□□ 0.52
SNAI3Q3KNW1 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SNAI3Q3KNW1 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SNAI3Q3KNW1 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.32■□□□□ 0.52
SNAI3Q3KNW1 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.32■□□□□ 0.52
SNAI3Q3KNW1 AL358852.1-201ENST00000623174 1268 ntBASIC18.32■□□□□ 0.52
SNAI3Q3KNW1 PKD1P6-201ENST00000343738 4769 ntBASIC18.32■□□□□ 0.52
SNAI3Q3KNW1 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SNAI3Q3KNW1 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
SNAI3Q3KNW1 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNAI3Q3KNW1 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.32■□□□□ 0.52
SNAI3Q3KNW1 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.32■□□□□ 0.52
SNAI3Q3KNW1 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNAI3Q3KNW1 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.32■□□□□ 0.52
SNAI3Q3KNW1 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNAI3Q3KNW1 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SNAI3Q3KNW1 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
SNAI3Q3KNW1 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.32■□□□□ 0.52
SNAI3Q3KNW1 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
SNAI3Q3KNW1 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNAI3Q3KNW1 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNAI3Q3KNW1 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNAI3Q3KNW1 IRS3P-201ENST00000223076 1006 ntBASIC18.31■□□□□ 0.52
SNAI3Q3KNW1 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNAI3Q3KNW1 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.31■□□□□ 0.52
SNAI3Q3KNW1 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.31■□□□□ 0.52
SNAI3Q3KNW1 TPRG1LP1-201ENST00000598702 760 ntBASIC18.31■□□□□ 0.52
SNAI3Q3KNW1 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.31■□□□□ 0.52
SNAI3Q3KNW1 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNAI3Q3KNW1 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNAI3Q3KNW1 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
SNAI3Q3KNW1 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNAI3Q3KNW1 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNAI3Q3KNW1 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNAI3Q3KNW1 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SNAI3Q3KNW1 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.3■□□□□ 0.52
SNAI3Q3KNW1 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.3■□□□□ 0.52
SNAI3Q3KNW1 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.3■□□□□ 0.52
SNAI3Q3KNW1 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNAI3Q3KNW1 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SNAI3Q3KNW1 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SNAI3Q3KNW1 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNAI3Q3KNW1 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.3■□□□□ 0.52
SNAI3Q3KNW1 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SNAI3Q3KNW1 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SNAI3Q3KNW1 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SNAI3Q3KNW1 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNAI3Q3KNW1 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNAI3Q3KNW1 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNAI3Q3KNW1 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.3■□□□□ 0.52
SNAI3Q3KNW1 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.3■□□□□ 0.52
SNAI3Q3KNW1 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.3■□□□□ 0.52
SNAI3Q3KNW1 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.29■□□□□ 0.52
SNAI3Q3KNW1 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNAI3Q3KNW1 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNAI3Q3KNW1 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNAI3Q3KNW1 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNAI3Q3KNW1 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms