Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC6A12P48065 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC6A12P48065 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC6A12P48065 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC6A12P48065 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC6A12P48065 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.46■□□□□ 0.87
SLC6A12P48065 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.46■□□□□ 0.87
SLC6A12P48065 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.46■□□□□ 0.87
SLC6A12P48065 EEF1DP3-203ENST00000566025 782 ntBASIC20.46■□□□□ 0.87
SLC6A12P48065 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.46■□□□□ 0.87
SLC6A12P48065 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.46■□□□□ 0.87
SLC6A12P48065 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC6A12P48065 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC6A12P48065 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC6A12P48065 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SLC6A12P48065 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC6A12P48065 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC6A12P48065 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC6A12P48065 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SLC6A12P48065 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC6A12P48065 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SLC6A12P48065 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
SLC6A12P48065 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.45■□□□□ 0.86
SLC6A12P48065 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.45■□□□□ 0.86
SLC6A12P48065 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.45■□□□□ 0.86
SLC6A12P48065 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SLC6A12P48065 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
SLC6A12P48065 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC6A12P48065 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SLC6A12P48065 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.45■□□□□ 0.86
SLC6A12P48065 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC6A12P48065 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.45■□□□□ 0.86
SLC6A12P48065 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC6A12P48065 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.44■□□□□ 0.86
SLC6A12P48065 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SLC6A12P48065 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SLC6A12P48065 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
SLC6A12P48065 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.44■□□□□ 0.86
SLC6A12P48065 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.44■□□□□ 0.86
SLC6A12P48065 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
SLC6A12P48065 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.44■□□□□ 0.86
SLC6A12P48065 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.44■□□□□ 0.86
SLC6A12P48065 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
SLC6A12P48065 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SLC6A12P48065 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.44■□□□□ 0.86
SLC6A12P48065 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.44■□□□□ 0.86
SLC6A12P48065 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SLC6A12P48065 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SLC6A12P48065 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.44■□□□□ 0.86
SLC6A12P48065 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.44■□□□□ 0.86
SLC6A12P48065 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
SLC6A12P48065 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC6A12P48065 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC6A12P48065 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
SLC6A12P48065 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SLC6A12P48065 ZNRF2P3-201ENST00000424200 374 ntBASIC20.43■□□□□ 0.86
SLC6A12P48065 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.43■□□□□ 0.86
SLC6A12P48065 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.43■□□□□ 0.86
SLC6A12P48065 AC053503.5-201ENST00000601508 636 ntBASIC20.43■□□□□ 0.86
SLC6A12P48065 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.43■□□□□ 0.86
SLC6A12P48065 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
SLC6A12P48065 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC6A12P48065 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.43■□□□□ 0.86
SLC6A12P48065 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
SLC6A12P48065 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SLC6A12P48065 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
SLC6A12P48065 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SLC6A12P48065 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC6A12P48065 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC6A12P48065 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC6A12P48065 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC6A12P48065 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SLC6A12P48065 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.42■□□□□ 0.86
SLC6A12P48065 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
SLC6A12P48065 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.42■□□□□ 0.86
SLC6A12P48065 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC6A12P48065 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.42■□□□□ 0.86
SLC6A12P48065 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC6A12P48065 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SLC6A12P48065 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC6A12P48065 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SLC6A12P48065 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SLC6A12P48065 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC6A12P48065 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC6A12P48065 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC6A12P48065 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.41■□□□□ 0.86
SLC6A12P48065 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC6A12P48065 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC6A12P48065 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SLC6A12P48065 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.41■□□□□ 0.86
SLC6A12P48065 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
SLC6A12P48065 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SLC6A12P48065 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.4■□□□□ 0.86
SLC6A12P48065 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC6A12P48065 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.4■□□□□ 0.86
SLC6A12P48065 AC123595.1-201ENST00000440769 1046 ntBASIC20.4■□□□□ 0.86
SLC6A12P48065 AC079140.4-201ENST00000507448 529 ntBASIC20.4■□□□□ 0.86
SLC6A12P48065 AL049796.1-201ENST00000565336 1766 ntBASIC20.4■□□□□ 0.86
SLC6A12P48065 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SLC6A12P48065 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms