Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC17.11■□□□□ 0.33
DEFA4P12838 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DEFA4P12838 OR2I1P-207ENST00000453522 948 ntBASIC17.11■□□□□ 0.33
DEFA4P12838 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC17.11■□□□□ 0.33
DEFA4P12838 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DEFA4P12838 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DEFA4P12838 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DEFA4P12838 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
DEFA4P12838 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
DEFA4P12838 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DEFA4P12838 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DEFA4P12838 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DEFA4P12838 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC17.1■□□□□ 0.33
DEFA4P12838 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DEFA4P12838 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DEFA4P12838 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
DEFA4P12838 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DEFA4P12838 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DEFA4P12838 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DEFA4P12838 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DEFA4P12838 SERBP1P1-201ENST00000396021 1160 ntBASIC17.1■□□□□ 0.33
DEFA4P12838 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DEFA4P12838 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
DEFA4P12838 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC17.1■□□□□ 0.33
DEFA4P12838 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DEFA4P12838 SF1-220ENST00000626028 704 ntTSL 2 BASIC17.1■□□□□ 0.33
DEFA4P12838 AL031602.1-201ENST00000633169 911 ntBASIC17.1■□□□□ 0.33
DEFA4P12838 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC17.1■□□□□ 0.33
DEFA4P12838 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
DEFA4P12838 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DEFA4P12838 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
DEFA4P12838 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC17.1■□□□□ 0.33
DEFA4P12838 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
DEFA4P12838 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
DEFA4P12838 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DEFA4P12838 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DEFA4P12838 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
DEFA4P12838 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
DEFA4P12838 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC17.09■□□□□ 0.33
DEFA4P12838 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC17.09■□□□□ 0.33
DEFA4P12838 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DEFA4P12838 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
DEFA4P12838 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
DEFA4P12838 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
DEFA4P12838 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
DEFA4P12838 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
DEFA4P12838 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
DEFA4P12838 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
DEFA4P12838 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.08■□□□□ 0.33
DEFA4P12838 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
DEFA4P12838 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
DEFA4P12838 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC17.08■□□□□ 0.33
DEFA4P12838 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
DEFA4P12838 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
DEFA4P12838 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
DEFA4P12838 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
DEFA4P12838 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
DEFA4P12838 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC17.08■□□□□ 0.32
DEFA4P12838 AC011298.3-201ENST00000615796 283 ntBASIC17.08■□□□□ 0.32
DEFA4P12838 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
DEFA4P12838 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
DEFA4P12838 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
DEFA4P12838 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
DEFA4P12838 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
DEFA4P12838 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
DEFA4P12838 AC244015.2-201ENST00000616358 1861 ntBASIC17.07■□□□□ 0.32
DEFA4P12838 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC17.07■□□□□ 0.32
DEFA4P12838 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
DEFA4P12838 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC17.07■□□□□ 0.32
DEFA4P12838 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
DEFA4P12838 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
DEFA4P12838 OR7E47P-201ENST00000546390 1422 ntBASIC17.07■□□□□ 0.32
DEFA4P12838 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
DEFA4P12838 AC008406.3-201ENST00000620001 1374 ntBASIC17.07■□□□□ 0.32
DEFA4P12838 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
DEFA4P12838 AC079089.2-201ENST00000531211 1277 ntBASIC17.07■□□□□ 0.32
DEFA4P12838 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC17.07■□□□□ 0.32
DEFA4P12838 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC17.07■□□□□ 0.32
DEFA4P12838 AC136469.2-201ENST00000623944 1028 ntBASIC17.07■□□□□ 0.32
DEFA4P12838 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
DEFA4P12838 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
DEFA4P12838 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
DEFA4P12838 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC17.07■□□□□ 0.32
DEFA4P12838 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
DEFA4P12838 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
DEFA4P12838 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
DEFA4P12838 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
DEFA4P12838 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
DEFA4P12838 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
DEFA4P12838 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
DEFA4P12838 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
DEFA4P12838 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
DEFA4P12838 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
DEFA4P12838 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
DEFA4P12838 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
DEFA4P12838 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
DEFA4P12838 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
DEFA4P12838 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
DEFA4P12838 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
DEFA4P12838 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms