Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.94■□□□□ 0.94
PCDHGA12O60330 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHGA12O60330 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.94■□□□□ 0.94
PCDHGA12O60330 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.94■□□□□ 0.94
PCDHGA12O60330 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHGA12O60330 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHGA12O60330 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHGA12O60330 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.94■□□□□ 0.94
PCDHGA12O60330 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.94■□□□□ 0.94
PCDHGA12O60330 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHGA12O60330 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHGA12O60330 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHGA12O60330 AP004607.7-201ENST00000527152 1677 ntBASIC20.93■□□□□ 0.94
PCDHGA12O60330 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHGA12O60330 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHGA12O60330 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHGA12O60330 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHGA12O60330 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHGA12O60330 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHGA12O60330 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.93■□□□□ 0.94
PCDHGA12O60330 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHGA12O60330 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHGA12O60330 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.93■□□□□ 0.94
PCDHGA12O60330 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.93■□□□□ 0.94
PCDHGA12O60330 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
PCDHGA12O60330 TERF1P5-201ENST00000477545 1207 ntBASIC20.93■□□□□ 0.94
PCDHGA12O60330 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHGA12O60330 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.93■□□□□ 0.94
PCDHGA12O60330 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHGA12O60330 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHGA12O60330 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHGA12O60330 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
PCDHGA12O60330 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHGA12O60330 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHGA12O60330 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHGA12O60330 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDHGA12O60330 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHGA12O60330 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
PCDHGA12O60330 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
PCDHGA12O60330 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
PCDHGA12O60330 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHGA12O60330 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHGA12O60330 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.92■□□□□ 0.94
PCDHGA12O60330 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.92■□□□□ 0.94
PCDHGA12O60330 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.92■□□□□ 0.94
PCDHGA12O60330 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.92■□□□□ 0.94
PCDHGA12O60330 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.92■□□□□ 0.94
PCDHGA12O60330 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
PCDHGA12O60330 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.92■□□□□ 0.94
PCDHGA12O60330 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHGA12O60330 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHGA12O60330 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHGA12O60330 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.91■□□□□ 0.94
PCDHGA12O60330 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.91■□□□□ 0.94
PCDHGA12O60330 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHGA12O60330 AC007322.4-201ENST00000509611 723 ntBASIC20.91■□□□□ 0.94
PCDHGA12O60330 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.91■□□□□ 0.94
PCDHGA12O60330 AC098934.4-201ENST00000564127 592 ntBASIC20.91■□□□□ 0.94
PCDHGA12O60330 AL034346.1-201ENST00000568244 1277 ntBASIC20.91■□□□□ 0.94
PCDHGA12O60330 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHGA12O60330 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.91■□□□□ 0.94
PCDHGA12O60330 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHGA12O60330 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.9■□□□□ 0.94
PCDHGA12O60330 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
PCDHGA12O60330 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHGA12O60330 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHGA12O60330 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
PCDHGA12O60330 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.9■□□□□ 0.94
PCDHGA12O60330 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.9■□□□□ 0.94
PCDHGA12O60330 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHGA12O60330 EEF1DP3-203ENST00000566025 782 ntBASIC20.9■□□□□ 0.94
PCDHGA12O60330 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.9■□□□□ 0.94
PCDHGA12O60330 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.9■□□□□ 0.94
PCDHGA12O60330 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHGA12O60330 LINC01960-201ENST00000563759 1884 ntBASIC20.9■□□□□ 0.94
PCDHGA12O60330 LINC00526-201ENST00000581067 1875 ntBASIC20.9■□□□□ 0.94
PCDHGA12O60330 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.89■□□□□ 0.94
PCDHGA12O60330 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.94
PCDHGA12O60330 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.89■□□□□ 0.94
PCDHGA12O60330 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.89■□□□□ 0.94
PCDHGA12O60330 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.89■□□□□ 0.94
PCDHGA12O60330 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.89■□□□□ 0.94
PCDHGA12O60330 AC068338.2-201ENST00000563278 1430 ntBASIC20.89■□□□□ 0.94
PCDHGA12O60330 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
PCDHGA12O60330 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHGA12O60330 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHGA12O60330 POU5F1P3-201ENST00000428824 1078 ntBASIC20.89■□□□□ 0.93
PCDHGA12O60330 AC053503.5-201ENST00000601508 636 ntBASIC20.89■□□□□ 0.93
PCDHGA12O60330 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
PCDHGA12O60330 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.89■□□□□ 0.93
PCDHGA12O60330 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHGA12O60330 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHGA12O60330 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGA12O60330 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
PCDHGA12O60330 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGA12O60330 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGA12O60330 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.88■□□□□ 0.93
PCDHGA12O60330 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGA12O60330 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGA12O60330 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms