Protein–RNA interactions for Protein: O00358

FOXE1, Forkhead box protein E1, humanhuman

Predicted RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXE1O00358 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FOXE1O00358 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FOXE1O00358 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.21■□□□□ 0.83
FOXE1O00358 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FOXE1O00358 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
FOXE1O00358 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.21■□□□□ 0.83
FOXE1O00358 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FOXE1O00358 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
FOXE1O00358 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
FOXE1O00358 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
FOXE1O00358 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
FOXE1O00358 AL024507.2-201ENST00000606070 2574 ntBASIC20.2■□□□□ 0.82
FOXE1O00358 AC005229.4-201ENST00000610085 2198 ntBASIC20.2■□□□□ 0.82
FOXE1O00358 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
FOXE1O00358 AC027612.3-201ENST00000413684 1047 ntBASIC20.2■□□□□ 0.82
FOXE1O00358 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.2■□□□□ 0.82
FOXE1O00358 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.2■□□□□ 0.82
FOXE1O00358 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
FOXE1O00358 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
FOXE1O00358 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
FOXE1O00358 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
FOXE1O00358 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
FOXE1O00358 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
FOXE1O00358 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
FOXE1O00358 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.19■□□□□ 0.82
FOXE1O00358 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
FOXE1O00358 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.19■□□□□ 0.82
FOXE1O00358 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.19■□□□□ 0.82
FOXE1O00358 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
FOXE1O00358 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.19■□□□□ 0.82
FOXE1O00358 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.19■□□□□ 0.82
FOXE1O00358 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.19■□□□□ 0.82
FOXE1O00358 MIR6084-201ENST00000622012 110 ntBASIC20.19■□□□□ 0.82
FOXE1O00358 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
FOXE1O00358 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
FOXE1O00358 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
FOXE1O00358 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
FOXE1O00358 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
FOXE1O00358 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
FOXE1O00358 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FOXE1O00358 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.18■□□□□ 0.82
FOXE1O00358 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FOXE1O00358 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.18■□□□□ 0.82
FOXE1O00358 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
FOXE1O00358 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.18■□□□□ 0.82
FOXE1O00358 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
FOXE1O00358 EEF1DP3-203ENST00000566025 782 ntBASIC20.18■□□□□ 0.82
FOXE1O00358 AC053503.5-201ENST00000601508 636 ntBASIC20.18■□□□□ 0.82
FOXE1O00358 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FOXE1O00358 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FOXE1O00358 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.18■□□□□ 0.82
FOXE1O00358 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
FOXE1O00358 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FOXE1O00358 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.18■□□□□ 0.82
FOXE1O00358 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
FOXE1O00358 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FOXE1O00358 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.17■□□□□ 0.82
FOXE1O00358 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FOXE1O00358 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FOXE1O00358 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
FOXE1O00358 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
FOXE1O00358 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.17■□□□□ 0.82
FOXE1O00358 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
FOXE1O00358 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
FOXE1O00358 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
FOXE1O00358 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FOXE1O00358 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
FOXE1O00358 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.17■□□□□ 0.82
FOXE1O00358 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FOXE1O00358 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
FOXE1O00358 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
FOXE1O00358 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.16■□□□□ 0.82
FOXE1O00358 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
FOXE1O00358 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.16■□□□□ 0.82
FOXE1O00358 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
FOXE1O00358 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
FOXE1O00358 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.16■□□□□ 0.82
FOXE1O00358 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.16■□□□□ 0.82
FOXE1O00358 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
FOXE1O00358 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
FOXE1O00358 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.16■□□□□ 0.82
FOXE1O00358 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.16■□□□□ 0.82
FOXE1O00358 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
FOXE1O00358 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
FOXE1O00358 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
FOXE1O00358 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
FOXE1O00358 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.15■□□□□ 0.82
FOXE1O00358 AF106564.1-201ENST00000607058 2553 ntBASIC20.15■□□□□ 0.82
FOXE1O00358 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.15■□□□□ 0.82
FOXE1O00358 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
FOXE1O00358 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.15■□□□□ 0.82
FOXE1O00358 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.15■□□□□ 0.82
FOXE1O00358 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
FOXE1O00358 AL049796.1-201ENST00000565336 1766 ntBASIC20.15■□□□□ 0.82
FOXE1O00358 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
FOXE1O00358 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
FOXE1O00358 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
FOXE1O00358 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
FOXE1O00358 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
FOXE1O00358 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms