Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NPIPB4C9JG80 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
NPIPB4C9JG80 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.78■□□□□ 0.6
NPIPB4C9JG80 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NPIPB4C9JG80 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NPIPB4C9JG80 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NPIPB4C9JG80 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NPIPB4C9JG80 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
NPIPB4C9JG80 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
NPIPB4C9JG80 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
NPIPB4C9JG80 AC105265.2-201ENST00000467189 838 ntBASIC18.78■□□□□ 0.6
NPIPB4C9JG80 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.78■□□□□ 0.6
NPIPB4C9JG80 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.78■□□□□ 0.6
NPIPB4C9JG80 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NPIPB4C9JG80 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NPIPB4C9JG80 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.78■□□□□ 0.6
NPIPB4C9JG80 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.78■□□□□ 0.6
NPIPB4C9JG80 AL049796.1-201ENST00000565336 1766 ntBASIC18.78■□□□□ 0.6
NPIPB4C9JG80 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
NPIPB4C9JG80 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.77■□□□□ 0.6
NPIPB4C9JG80 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NPIPB4C9JG80 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NPIPB4C9JG80 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NPIPB4C9JG80 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
NPIPB4C9JG80 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.77■□□□□ 0.6
NPIPB4C9JG80 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NPIPB4C9JG80 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.77■□□□□ 0.6
NPIPB4C9JG80 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.77■□□□□ 0.6
NPIPB4C9JG80 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
NPIPB4C9JG80 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NPIPB4C9JG80 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC18.77■□□□□ 0.59
NPIPB4C9JG80 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
NPIPB4C9JG80 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
NPIPB4C9JG80 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
NPIPB4C9JG80 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
NPIPB4C9JG80 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.59
NPIPB4C9JG80 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.76■□□□□ 0.59
NPIPB4C9JG80 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.76■□□□□ 0.59
NPIPB4C9JG80 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.76■□□□□ 0.59
NPIPB4C9JG80 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.76■□□□□ 0.59
NPIPB4C9JG80 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.76■□□□□ 0.59
NPIPB4C9JG80 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NPIPB4C9JG80 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NPIPB4C9JG80 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
NPIPB4C9JG80 AC005229.4-201ENST00000610085 2198 ntBASIC18.76■□□□□ 0.59
NPIPB4C9JG80 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
NPIPB4C9JG80 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NPIPB4C9JG80 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
NPIPB4C9JG80 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
NPIPB4C9JG80 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.75■□□□□ 0.59
NPIPB4C9JG80 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NPIPB4C9JG80 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NPIPB4C9JG80 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NPIPB4C9JG80 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.74■□□□□ 0.59
NPIPB4C9JG80 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NPIPB4C9JG80 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NPIPB4C9JG80 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NPIPB4C9JG80 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NPIPB4C9JG80 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.74■□□□□ 0.59
NPIPB4C9JG80 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NPIPB4C9JG80 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NPIPB4C9JG80 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NPIPB4C9JG80 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
NPIPB4C9JG80 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NPIPB4C9JG80 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.74■□□□□ 0.59
NPIPB4C9JG80 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
NPIPB4C9JG80 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NPIPB4C9JG80 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NPIPB4C9JG80 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.74■□□□□ 0.59
NPIPB4C9JG80 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
NPIPB4C9JG80 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.74■□□□□ 0.59
NPIPB4C9JG80 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.73■□□□□ 0.59
NPIPB4C9JG80 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
NPIPB4C9JG80 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.73■□□□□ 0.59
NPIPB4C9JG80 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NPIPB4C9JG80 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
NPIPB4C9JG80 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
NPIPB4C9JG80 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NPIPB4C9JG80 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.73■□□□□ 0.59
NPIPB4C9JG80 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.73■□□□□ 0.59
NPIPB4C9JG80 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NPIPB4C9JG80 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NPIPB4C9JG80 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NPIPB4C9JG80 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NPIPB4C9JG80 KRT87P-202ENST00000534226 1464 ntBASIC18.72■□□□□ 0.59
NPIPB4C9JG80 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NPIPB4C9JG80 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
NPIPB4C9JG80 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NPIPB4C9JG80 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.72■□□□□ 0.59
NPIPB4C9JG80 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.72■□□□□ 0.59
NPIPB4C9JG80 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NPIPB4C9JG80 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NPIPB4C9JG80 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NPIPB4C9JG80 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
NPIPB4C9JG80 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
NPIPB4C9JG80 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
NPIPB4C9JG80 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.71■□□□□ 0.59
NPIPB4C9JG80 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NPIPB4C9JG80 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
NPIPB4C9JG80 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms