Protein–RNA interactions for Protein: A6NHT5

HMX3, Homeobox protein HMX3, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMX3A6NHT5 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HMX3A6NHT5 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HMX3A6NHT5 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
HMX3A6NHT5 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HMX3A6NHT5 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.29■□□□□ 0.52
HMX3A6NHT5 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HMX3A6NHT5 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.28■□□□□ 0.52
HMX3A6NHT5 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.28■□□□□ 0.52
HMX3A6NHT5 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HMX3A6NHT5 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
HMX3A6NHT5 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HMX3A6NHT5 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HMX3A6NHT5 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
HMX3A6NHT5 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HMX3A6NHT5 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HMX3A6NHT5 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HMX3A6NHT5 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HMX3A6NHT5 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
HMX3A6NHT5 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC18.28■□□□□ 0.52
HMX3A6NHT5 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.28■□□□□ 0.52
HMX3A6NHT5 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HMX3A6NHT5 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HMX3A6NHT5 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HMX3A6NHT5 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.28■□□□□ 0.52
HMX3A6NHT5 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HMX3A6NHT5 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.28■□□□□ 0.52
HMX3A6NHT5 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
HMX3A6NHT5 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.27■□□□□ 0.52
HMX3A6NHT5 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
HMX3A6NHT5 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HMX3A6NHT5 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
HMX3A6NHT5 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HMX3A6NHT5 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HMX3A6NHT5 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
HMX3A6NHT5 IDNK-201ENST00000376417 511 ntTSL 5 BASIC18.27■□□□□ 0.52
HMX3A6NHT5 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HMX3A6NHT5 AC022616.5-201ENST00000518796 181 ntBASIC18.27■□□□□ 0.52
HMX3A6NHT5 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC18.27■□□□□ 0.52
HMX3A6NHT5 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC18.27■□□□□ 0.52
HMX3A6NHT5 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HMX3A6NHT5 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HMX3A6NHT5 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HMX3A6NHT5 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
HMX3A6NHT5 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HMX3A6NHT5 OXCT2P1-201ENST00000447263 1535 ntBASIC18.27■□□□□ 0.51
HMX3A6NHT5 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
HMX3A6NHT5 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
HMX3A6NHT5 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.27■□□□□ 0.51
HMX3A6NHT5 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
HMX3A6NHT5 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
HMX3A6NHT5 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
HMX3A6NHT5 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HMX3A6NHT5 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HMX3A6NHT5 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
HMX3A6NHT5 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
HMX3A6NHT5 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.26■□□□□ 0.51
HMX3A6NHT5 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
HMX3A6NHT5 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HMX3A6NHT5 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
HMX3A6NHT5 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
HMX3A6NHT5 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
HMX3A6NHT5 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC18.26■□□□□ 0.51
HMX3A6NHT5 AC011551.1-201ENST00000614101 683 ntBASIC18.26■□□□□ 0.51
HMX3A6NHT5 AC074183.2-201ENST00000623112 922 ntBASIC18.26■□□□□ 0.51
HMX3A6NHT5 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
HMX3A6NHT5 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HMX3A6NHT5 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.26■□□□□ 0.51
HMX3A6NHT5 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
HMX3A6NHT5 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.26■□□□□ 0.51
HMX3A6NHT5 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
HMX3A6NHT5 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HMX3A6NHT5 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HMX3A6NHT5 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
HMX3A6NHT5 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HMX3A6NHT5 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HMX3A6NHT5 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HMX3A6NHT5 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HMX3A6NHT5 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.25■□□□□ 0.51
HMX3A6NHT5 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
HMX3A6NHT5 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
HMX3A6NHT5 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.25■□□□□ 0.51
HMX3A6NHT5 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HMX3A6NHT5 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
HMX3A6NHT5 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HMX3A6NHT5 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC18.25■□□□□ 0.51
HMX3A6NHT5 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC18.25■□□□□ 0.51
HMX3A6NHT5 GAK-223ENST00000628912 497 ntTSL 5 BASIC18.25■□□□□ 0.51
HMX3A6NHT5 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.25■□□□□ 0.51
HMX3A6NHT5 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
HMX3A6NHT5 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HMX3A6NHT5 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HMX3A6NHT5 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HMX3A6NHT5 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HMX3A6NHT5 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
HMX3A6NHT5 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.25■□□□□ 0.51
HMX3A6NHT5 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
HMX3A6NHT5 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HMX3A6NHT5 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.24■□□□□ 0.51
HMX3A6NHT5 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
HMX3A6NHT5 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms