Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
TRAV13-2A0A0B4J235 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC13.96□□□□□ -0.17
TRAV13-2A0A0B4J235 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC13.96□□□□□ -0.17
TRAV13-2A0A0B4J235 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRAV13-2A0A0B4J235 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.18
TRAV13-2A0A0B4J235 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRAV13-2A0A0B4J235 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRAV13-2A0A0B4J235 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV13-2A0A0B4J235 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV13-2A0A0B4J235 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
TRAV13-2A0A0B4J235 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV13-2A0A0B4J235 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
TRAV13-2A0A0B4J235 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV13-2A0A0B4J235 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC13.95□□□□□ -0.18
TRAV13-2A0A0B4J235 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
TRAV13-2A0A0B4J235 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC13.95□□□□□ -0.18
TRAV13-2A0A0B4J235 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
TRAV13-2A0A0B4J235 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC13.95□□□□□ -0.18
TRAV13-2A0A0B4J235 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV13-2A0A0B4J235 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV13-2A0A0B4J235 AC133552.2-201ENST00000619106 1032 ntBASIC13.95□□□□□ -0.18
TRAV13-2A0A0B4J235 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC13.95□□□□□ -0.18
TRAV13-2A0A0B4J235 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV13-2A0A0B4J235 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV13-2A0A0B4J235 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV13-2A0A0B4J235 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC13.95□□□□□ -0.18
TRAV13-2A0A0B4J235 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV13-2A0A0B4J235 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV13-2A0A0B4J235 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC13.95□□□□□ -0.18
TRAV13-2A0A0B4J235 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC13.94□□□□□ -0.18
TRAV13-2A0A0B4J235 AL391422.3-201ENST00000603791 2761 ntBASIC13.94□□□□□ -0.18
TRAV13-2A0A0B4J235 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV13-2A0A0B4J235 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
TRAV13-2A0A0B4J235 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC13.94□□□□□ -0.18
TRAV13-2A0A0B4J235 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC13.94□□□□□ -0.18
TRAV13-2A0A0B4J235 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV13-2A0A0B4J235 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV13-2A0A0B4J235 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV13-2A0A0B4J235 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC13.94□□□□□ -0.18
TRAV13-2A0A0B4J235 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV13-2A0A0B4J235 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV13-2A0A0B4J235 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC13.94□□□□□ -0.18
TRAV13-2A0A0B4J235 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV13-2A0A0B4J235 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
TRAV13-2A0A0B4J235 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV13-2A0A0B4J235 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV13-2A0A0B4J235 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV13-2A0A0B4J235 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC13.94□□□□□ -0.18
TRAV13-2A0A0B4J235 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV13-2A0A0B4J235 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV13-2A0A0B4J235 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV13-2A0A0B4J235 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC13.94□□□□□ -0.18
TRAV13-2A0A0B4J235 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
TRAV13-2A0A0B4J235 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV13-2A0A0B4J235 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC13.94□□□□□ -0.18
TRAV13-2A0A0B4J235 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV13-2A0A0B4J235 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC13.94□□□□□ -0.18
TRAV13-2A0A0B4J235 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV13-2A0A0B4J235 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV13-2A0A0B4J235 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
TRAV13-2A0A0B4J235 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV13-2A0A0B4J235 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV13-2A0A0B4J235 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
TRAV13-2A0A0B4J235 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV13-2A0A0B4J235 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
TRAV13-2A0A0B4J235 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC13.93□□□□□ -0.18
TRAV13-2A0A0B4J235 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
TRAV13-2A0A0B4J235 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC13.93□□□□□ -0.18
TRAV13-2A0A0B4J235 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV13-2A0A0B4J235 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV13-2A0A0B4J235 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV13-2A0A0B4J235 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC13.93□□□□□ -0.18
TRAV13-2A0A0B4J235 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
TRAV13-2A0A0B4J235 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV13-2A0A0B4J235 C17orf82-201ENST00000623772 1530 ntBASIC13.93□□□□□ -0.18
TRAV13-2A0A0B4J235 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
TRAV13-2A0A0B4J235 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV13-2A0A0B4J235 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC13.93□□□□□ -0.18
TRAV13-2A0A0B4J235 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV13-2A0A0B4J235 AL049796.1-201ENST00000565336 1766 ntBASIC13.93□□□□□ -0.18
TRAV13-2A0A0B4J235 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV13-2A0A0B4J235 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC13.93□□□□□ -0.18
TRAV13-2A0A0B4J235 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV13-2A0A0B4J235 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV13-2A0A0B4J235 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV13-2A0A0B4J235 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC13.93□□□□□ -0.18
TRAV13-2A0A0B4J235 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV13-2A0A0B4J235 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV13-2A0A0B4J235 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV13-2A0A0B4J235 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV13-2A0A0B4J235 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV13-2A0A0B4J235 AC009831.1-201ENST00000580420 1582 ntBASIC13.92□□□□□ -0.18
TRAV13-2A0A0B4J235 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
TRAV13-2A0A0B4J235 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
TRAV13-2A0A0B4J235 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
TRAV13-2A0A0B4J235 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV13-2A0A0B4J235 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC13.92□□□□□ -0.18
TRAV13-2A0A0B4J235 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
TRAV13-2A0A0B4J235 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV13-2A0A0B4J235 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms