Protein–RNA interactions for Protein: Q9Y4K3

TRAF6, TNF receptor-associated factor 6, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF6Q9Y4K3 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.61■□□□□ 0.89
TRAF6Q9Y4K3 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.61■□□□□ 0.89
TRAF6Q9Y4K3 AC136469.2-201ENST00000623944 1028 ntBASIC20.61■□□□□ 0.89
TRAF6Q9Y4K3 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRAF6Q9Y4K3 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRAF6Q9Y4K3 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRAF6Q9Y4K3 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
TRAF6Q9Y4K3 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRAF6Q9Y4K3 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
TRAF6Q9Y4K3 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRAF6Q9Y4K3 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRAF6Q9Y4K3 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
TRAF6Q9Y4K3 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.6■□□□□ 0.89
TRAF6Q9Y4K3 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRAF6Q9Y4K3 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRAF6Q9Y4K3 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRAF6Q9Y4K3 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRAF6Q9Y4K3 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRAF6Q9Y4K3 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRAF6Q9Y4K3 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRAF6Q9Y4K3 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.6■□□□□ 0.89
TRAF6Q9Y4K3 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRAF6Q9Y4K3 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRAF6Q9Y4K3 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRAF6Q9Y4K3 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.6■□□□□ 0.89
TRAF6Q9Y4K3 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
TRAF6Q9Y4K3 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.59■□□□□ 0.89
TRAF6Q9Y4K3 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAF6Q9Y4K3 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
TRAF6Q9Y4K3 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAF6Q9Y4K3 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAF6Q9Y4K3 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAF6Q9Y4K3 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRAF6Q9Y4K3 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
TRAF6Q9Y4K3 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.59■□□□□ 0.89
TRAF6Q9Y4K3 SLC47A1P1-202ENST00000449666 945 ntBASIC20.59■□□□□ 0.89
TRAF6Q9Y4K3 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.59■□□□□ 0.89
TRAF6Q9Y4K3 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.59■□□□□ 0.89
TRAF6Q9Y4K3 MIR4466-201ENST00000606121 54 ntBASIC20.59■□□□□ 0.89
TRAF6Q9Y4K3 AC011298.3-201ENST00000615796 283 ntBASIC20.59■□□□□ 0.89
TRAF6Q9Y4K3 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAF6Q9Y4K3 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAF6Q9Y4K3 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
TRAF6Q9Y4K3 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAF6Q9Y4K3 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRAF6Q9Y4K3 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.59■□□□□ 0.89
TRAF6Q9Y4K3 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAF6Q9Y4K3 LINC01521-201ENST00000504184 1943 ntBASIC20.59■□□□□ 0.89
TRAF6Q9Y4K3 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRAF6Q9Y4K3 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRAF6Q9Y4K3 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRAF6Q9Y4K3 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRAF6Q9Y4K3 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TRAF6Q9Y4K3 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.58■□□□□ 0.89
TRAF6Q9Y4K3 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRAF6Q9Y4K3 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.58■□□□□ 0.88
TRAF6Q9Y4K3 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
TRAF6Q9Y4K3 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.58■□□□□ 0.88
TRAF6Q9Y4K3 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
TRAF6Q9Y4K3 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.57■□□□□ 0.88
TRAF6Q9Y4K3 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRAF6Q9Y4K3 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRAF6Q9Y4K3 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRAF6Q9Y4K3 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.57■□□□□ 0.88
TRAF6Q9Y4K3 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRAF6Q9Y4K3 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRAF6Q9Y4K3 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRAF6Q9Y4K3 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.57■□□□□ 0.88
TRAF6Q9Y4K3 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRAF6Q9Y4K3 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRAF6Q9Y4K3 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
TRAF6Q9Y4K3 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRAF6Q9Y4K3 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.57■□□□□ 0.88
TRAF6Q9Y4K3 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
TRAF6Q9Y4K3 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAF6Q9Y4K3 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAF6Q9Y4K3 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAF6Q9Y4K3 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.56■□□□□ 0.88
TRAF6Q9Y4K3 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
TRAF6Q9Y4K3 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAF6Q9Y4K3 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
TRAF6Q9Y4K3 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.56■□□□□ 0.88
TRAF6Q9Y4K3 AL356441.2-201ENST00000443009 864 ntBASIC20.56■□□□□ 0.88
TRAF6Q9Y4K3 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.56■□□□□ 0.88
TRAF6Q9Y4K3 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.56■□□□□ 0.88
TRAF6Q9Y4K3 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
TRAF6Q9Y4K3 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.56■□□□□ 0.88
TRAF6Q9Y4K3 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
TRAF6Q9Y4K3 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAF6Q9Y4K3 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRAF6Q9Y4K3 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.56■□□□□ 0.88
TRAF6Q9Y4K3 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
TRAF6Q9Y4K3 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAF6Q9Y4K3 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAF6Q9Y4K3 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.56■□□□□ 0.88
TRAF6Q9Y4K3 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRAF6Q9Y4K3 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.55■□□□□ 0.88
TRAF6Q9Y4K3 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TRAF6Q9Y4K3 AP006587.3-201ENST00000525742 1516 ntBASIC20.55■□□□□ 0.88
TRAF6Q9Y4K3 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms