Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
UBQLN2Q9UHD9 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
UBQLN2Q9UHD9 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC17.83■□□□□ 0.45
UBQLN2Q9UHD9 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC17.83■□□□□ 0.45
UBQLN2Q9UHD9 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.45
UBQLN2Q9UHD9 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
UBQLN2Q9UHD9 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC17.83■□□□□ 0.45
UBQLN2Q9UHD9 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
UBQLN2Q9UHD9 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
UBQLN2Q9UHD9 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
UBQLN2Q9UHD9 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
UBQLN2Q9UHD9 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
UBQLN2Q9UHD9 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
UBQLN2Q9UHD9 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
UBQLN2Q9UHD9 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.82■□□□□ 0.44
UBQLN2Q9UHD9 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
UBQLN2Q9UHD9 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
UBQLN2Q9UHD9 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
UBQLN2Q9UHD9 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
UBQLN2Q9UHD9 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC17.82■□□□□ 0.44
UBQLN2Q9UHD9 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
UBQLN2Q9UHD9 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.82■□□□□ 0.44
UBQLN2Q9UHD9 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
UBQLN2Q9UHD9 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.82■□□□□ 0.44
UBQLN2Q9UHD9 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
UBQLN2Q9UHD9 SMG8-203ENST00000578922 2178 ntBASIC17.81■□□□□ 0.44
UBQLN2Q9UHD9 KRT8P33-201ENST00000508125 1423 ntBASIC17.81■□□□□ 0.44
UBQLN2Q9UHD9 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC17.81■□□□□ 0.44
UBQLN2Q9UHD9 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
UBQLN2Q9UHD9 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
UBQLN2Q9UHD9 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.81■□□□□ 0.44
UBQLN2Q9UHD9 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
UBQLN2Q9UHD9 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
UBQLN2Q9UHD9 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
UBQLN2Q9UHD9 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
UBQLN2Q9UHD9 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.81■□□□□ 0.44
UBQLN2Q9UHD9 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
UBQLN2Q9UHD9 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
UBQLN2Q9UHD9 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
UBQLN2Q9UHD9 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC17.81■□□□□ 0.44
UBQLN2Q9UHD9 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC17.81■□□□□ 0.44
UBQLN2Q9UHD9 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
UBQLN2Q9UHD9 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
UBQLN2Q9UHD9 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
UBQLN2Q9UHD9 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
UBQLN2Q9UHD9 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
UBQLN2Q9UHD9 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
UBQLN2Q9UHD9 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
UBQLN2Q9UHD9 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
UBQLN2Q9UHD9 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
UBQLN2Q9UHD9 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC17.8■□□□□ 0.44
UBQLN2Q9UHD9 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.8■□□□□ 0.44
UBQLN2Q9UHD9 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBQLN2Q9UHD9 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBQLN2Q9UHD9 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
UBQLN2Q9UHD9 BEX3-202ENST00000372634 753 ntTSL 2 BASIC17.8■□□□□ 0.44
UBQLN2Q9UHD9 KRT18P10-201ENST00000388836 1287 ntBASIC17.8■□□□□ 0.44
UBQLN2Q9UHD9 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBQLN2Q9UHD9 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC17.8■□□□□ 0.44
UBQLN2Q9UHD9 AC087393.1-201ENST00000582896 145 ntBASIC17.8■□□□□ 0.44
UBQLN2Q9UHD9 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBQLN2Q9UHD9 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBQLN2Q9UHD9 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBQLN2Q9UHD9 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBQLN2Q9UHD9 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
UBQLN2Q9UHD9 PCDHAC2-203ENST00000615316 3011 ntBASIC17.8■□□□□ 0.44
UBQLN2Q9UHD9 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC17.79■□□□□ 0.44
UBQLN2Q9UHD9 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
UBQLN2Q9UHD9 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
UBQLN2Q9UHD9 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBQLN2Q9UHD9 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBQLN2Q9UHD9 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
UBQLN2Q9UHD9 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.79■□□□□ 0.44
UBQLN2Q9UHD9 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBQLN2Q9UHD9 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
UBQLN2Q9UHD9 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBQLN2Q9UHD9 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBQLN2Q9UHD9 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.79■□□□□ 0.44
UBQLN2Q9UHD9 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC17.79■□□□□ 0.44
UBQLN2Q9UHD9 GABARAPL3-202ENST00000624044 1851 ntBASIC17.79■□□□□ 0.44
UBQLN2Q9UHD9 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
UBQLN2Q9UHD9 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBQLN2Q9UHD9 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
UBQLN2Q9UHD9 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBQLN2Q9UHD9 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBQLN2Q9UHD9 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBQLN2Q9UHD9 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBQLN2Q9UHD9 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
UBQLN2Q9UHD9 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
UBQLN2Q9UHD9 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBQLN2Q9UHD9 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBQLN2Q9UHD9 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.78■□□□□ 0.44
UBQLN2Q9UHD9 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
UBQLN2Q9UHD9 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC17.78■□□□□ 0.44
UBQLN2Q9UHD9 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
UBQLN2Q9UHD9 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
UBQLN2Q9UHD9 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBQLN2Q9UHD9 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
UBQLN2Q9UHD9 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
UBQLN2Q9UHD9 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms