Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.34■□□□□ 0.69
CHRNA9Q9UGM1 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CHRNA9Q9UGM1 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CHRNA9Q9UGM1 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHRNA9Q9UGM1 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
CHRNA9Q9UGM1 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CHRNA9Q9UGM1 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CHRNA9Q9UGM1 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
CHRNA9Q9UGM1 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.33■□□□□ 0.68
CHRNA9Q9UGM1 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.33■□□□□ 0.68
CHRNA9Q9UGM1 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CHRNA9Q9UGM1 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CHRNA9Q9UGM1 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
CHRNA9Q9UGM1 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.33■□□□□ 0.68
CHRNA9Q9UGM1 MIR6084-201ENST00000622012 110 ntBASIC19.33■□□□□ 0.68
CHRNA9Q9UGM1 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.33■□□□□ 0.68
CHRNA9Q9UGM1 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
CHRNA9Q9UGM1 Z98882.1-201ENST00000622160 2253 ntBASIC19.33■□□□□ 0.68
CHRNA9Q9UGM1 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CHRNA9Q9UGM1 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CHRNA9Q9UGM1 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.33■□□□□ 0.68
CHRNA9Q9UGM1 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHRNA9Q9UGM1 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHRNA9Q9UGM1 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.32■□□□□ 0.68
CHRNA9Q9UGM1 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.32■□□□□ 0.68
CHRNA9Q9UGM1 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.32■□□□□ 0.68
CHRNA9Q9UGM1 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CHRNA9Q9UGM1 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHRNA9Q9UGM1 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHRNA9Q9UGM1 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.32■□□□□ 0.68
CHRNA9Q9UGM1 ZNRF2P3-201ENST00000424200 374 ntBASIC19.32■□□□□ 0.68
CHRNA9Q9UGM1 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.32■□□□□ 0.68
CHRNA9Q9UGM1 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.32■□□□□ 0.68
CHRNA9Q9UGM1 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHRNA9Q9UGM1 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CHRNA9Q9UGM1 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHRNA9Q9UGM1 AC005229.4-201ENST00000610085 2198 ntBASIC19.32■□□□□ 0.68
CHRNA9Q9UGM1 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.32■□□□□ 0.68
CHRNA9Q9UGM1 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHRNA9Q9UGM1 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.32■□□□□ 0.68
CHRNA9Q9UGM1 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHRNA9Q9UGM1 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHRNA9Q9UGM1 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHRNA9Q9UGM1 AC005224.4-201ENST00000583262 1652 ntBASIC19.31■□□□□ 0.68
CHRNA9Q9UGM1 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.31■□□□□ 0.68
CHRNA9Q9UGM1 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHRNA9Q9UGM1 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHRNA9Q9UGM1 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.31■□□□□ 0.68
CHRNA9Q9UGM1 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHRNA9Q9UGM1 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHRNA9Q9UGM1 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CHRNA9Q9UGM1 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHRNA9Q9UGM1 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CHRNA9Q9UGM1 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.3■□□□□ 0.68
CHRNA9Q9UGM1 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CHRNA9Q9UGM1 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHRNA9Q9UGM1 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.3■□□□□ 0.68
CHRNA9Q9UGM1 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHRNA9Q9UGM1 AC027612.3-201ENST00000413684 1047 ntBASIC19.3■□□□□ 0.68
CHRNA9Q9UGM1 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CHRNA9Q9UGM1 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.3■□□□□ 0.68
CHRNA9Q9UGM1 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHRNA9Q9UGM1 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CHRNA9Q9UGM1 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHRNA9Q9UGM1 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.3■□□□□ 0.68
CHRNA9Q9UGM1 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CHRNA9Q9UGM1 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHRNA9Q9UGM1 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CHRNA9Q9UGM1 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHRNA9Q9UGM1 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.29■□□□□ 0.68
CHRNA9Q9UGM1 TPRG1LP1-201ENST00000598702 760 ntBASIC19.29■□□□□ 0.68
CHRNA9Q9UGM1 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.29■□□□□ 0.68
CHRNA9Q9UGM1 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHRNA9Q9UGM1 AC055733.4-201ENST00000638462 1354 ntBASIC19.29■□□□□ 0.68
CHRNA9Q9UGM1 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHRNA9Q9UGM1 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHRNA9Q9UGM1 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHRNA9Q9UGM1 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.28■□□□□ 0.68
CHRNA9Q9UGM1 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHRNA9Q9UGM1 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CHRNA9Q9UGM1 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.28■□□□□ 0.68
CHRNA9Q9UGM1 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.28■□□□□ 0.68
CHRNA9Q9UGM1 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHRNA9Q9UGM1 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHRNA9Q9UGM1 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHRNA9Q9UGM1 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHRNA9Q9UGM1 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.28■□□□□ 0.68
CHRNA9Q9UGM1 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHRNA9Q9UGM1 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.28■□□□□ 0.68
CHRNA9Q9UGM1 AC104564.3-201ENST00000582367 638 ntBASIC19.28■□□□□ 0.68
CHRNA9Q9UGM1 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.28■□□□□ 0.68
CHRNA9Q9UGM1 AC003102.1-202ENST00000563394 1796 ntBASIC19.28■□□□□ 0.68
CHRNA9Q9UGM1 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHRNA9Q9UGM1 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.28■□□□□ 0.68
CHRNA9Q9UGM1 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.28■□□□□ 0.68
CHRNA9Q9UGM1 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHRNA9Q9UGM1 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHRNA9Q9UGM1 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHRNA9Q9UGM1 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.27■□□□□ 0.68
CHRNA9Q9UGM1 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms