Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CDC42SE1Q9NRR8 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
CDC42SE1Q9NRR8 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CDC42SE1Q9NRR8 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
CDC42SE1Q9NRR8 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
CDC42SE1Q9NRR8 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
CDC42SE1Q9NRR8 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC11□□□□□ -0.65
CDC42SE1Q9NRR8 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC11□□□□□ -0.65
CDC42SE1Q9NRR8 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
CDC42SE1Q9NRR8 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC11□□□□□ -0.65
CDC42SE1Q9NRR8 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
CDC42SE1Q9NRR8 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC11□□□□□ -0.65
CDC42SE1Q9NRR8 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CDC42SE1Q9NRR8 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC11□□□□□ -0.65
CDC42SE1Q9NRR8 AC010542.4-201ENST00000563151 1910 ntBASIC11□□□□□ -0.65
CDC42SE1Q9NRR8 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC11□□□□□ -0.65
CDC42SE1Q9NRR8 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC11□□□□□ -0.65
CDC42SE1Q9NRR8 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC11□□□□□ -0.65
CDC42SE1Q9NRR8 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CDC42SE1Q9NRR8 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
CDC42SE1Q9NRR8 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CDC42SE1Q9NRR8 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CDC42SE1Q9NRR8 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC11□□□□□ -0.65
CDC42SE1Q9NRR8 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
CDC42SE1Q9NRR8 FER1L4-210ENST00000615531 5998 ntBASIC11□□□□□ -0.65
CDC42SE1Q9NRR8 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CDC42SE1Q9NRR8 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC11□□□□□ -0.65
CDC42SE1Q9NRR8 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC11□□□□□ -0.65
CDC42SE1Q9NRR8 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CDC42SE1Q9NRR8 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CDC42SE1Q9NRR8 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CDC42SE1Q9NRR8 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC11□□□□□ -0.65
CDC42SE1Q9NRR8 AC020763.4-201ENST00000623414 4170 ntBASIC11□□□□□ -0.65
CDC42SE1Q9NRR8 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
CDC42SE1Q9NRR8 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CDC42SE1Q9NRR8 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CDC42SE1Q9NRR8 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CDC42SE1Q9NRR8 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CDC42SE1Q9NRR8 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC10.99□□□□□ -0.65
CDC42SE1Q9NRR8 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CDC42SE1Q9NRR8 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
CDC42SE1Q9NRR8 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CDC42SE1Q9NRR8 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
CDC42SE1Q9NRR8 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
CDC42SE1Q9NRR8 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC10.99□□□□□ -0.65
CDC42SE1Q9NRR8 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CDC42SE1Q9NRR8 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC10.99□□□□□ -0.65
CDC42SE1Q9NRR8 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CDC42SE1Q9NRR8 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
CDC42SE1Q9NRR8 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CDC42SE1Q9NRR8 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC10.99□□□□□ -0.65
CDC42SE1Q9NRR8 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
CDC42SE1Q9NRR8 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CDC42SE1Q9NRR8 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC10.99□□□□□ -0.65
CDC42SE1Q9NRR8 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC10.99□□□□□ -0.65
CDC42SE1Q9NRR8 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
CDC42SE1Q9NRR8 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CDC42SE1Q9NRR8 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
CDC42SE1Q9NRR8 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CDC42SE1Q9NRR8 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC10.99□□□□□ -0.65
CDC42SE1Q9NRR8 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC10.99□□□□□ -0.65
CDC42SE1Q9NRR8 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
CDC42SE1Q9NRR8 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
CDC42SE1Q9NRR8 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
CDC42SE1Q9NRR8 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC10.99□□□□□ -0.65
CDC42SE1Q9NRR8 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CDC42SE1Q9NRR8 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CDC42SE1Q9NRR8 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CDC42SE1Q9NRR8 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC10.98□□□□□ -0.65
CDC42SE1Q9NRR8 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CDC42SE1Q9NRR8 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CDC42SE1Q9NRR8 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CDC42SE1Q9NRR8 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
CDC42SE1Q9NRR8 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
CDC42SE1Q9NRR8 ME2-218ENST00000640965 2476 ntTSL 5 BASIC10.98□□□□□ -0.65
CDC42SE1Q9NRR8 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC10.98□□□□□ -0.65
CDC42SE1Q9NRR8 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC10.98□□□□□ -0.65
CDC42SE1Q9NRR8 AC007613.1-201ENST00000572811 2597 ntBASIC10.98□□□□□ -0.65
CDC42SE1Q9NRR8 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
CDC42SE1Q9NRR8 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
CDC42SE1Q9NRR8 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
CDC42SE1Q9NRR8 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
CDC42SE1Q9NRR8 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC10.98□□□□□ -0.65
CDC42SE1Q9NRR8 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
CDC42SE1Q9NRR8 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC10.98□□□□□ -0.65
CDC42SE1Q9NRR8 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
CDC42SE1Q9NRR8 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CDC42SE1Q9NRR8 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
CDC42SE1Q9NRR8 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC10.98□□□□□ -0.65
CDC42SE1Q9NRR8 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
CDC42SE1Q9NRR8 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC10.98□□□□□ -0.65
CDC42SE1Q9NRR8 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
CDC42SE1Q9NRR8 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CDC42SE1Q9NRR8 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
CDC42SE1Q9NRR8 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
CDC42SE1Q9NRR8 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
CDC42SE1Q9NRR8 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CDC42SE1Q9NRR8 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC10.97□□□□□ -0.65
CDC42SE1Q9NRR8 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
CDC42SE1Q9NRR8 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms