Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SND1-IT1Q9HBX3 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
SND1-IT1Q9HBX3 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SND1-IT1Q9HBX3 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC14.15□□□□□ -0.14
SND1-IT1Q9HBX3 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SND1-IT1Q9HBX3 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC14.15□□□□□ -0.14
SND1-IT1Q9HBX3 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SND1-IT1Q9HBX3 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SND1-IT1Q9HBX3 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SND1-IT1Q9HBX3 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SND1-IT1Q9HBX3 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC14.15□□□□□ -0.14
SND1-IT1Q9HBX3 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SND1-IT1Q9HBX3 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC14.15□□□□□ -0.14
SND1-IT1Q9HBX3 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SND1-IT1Q9HBX3 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SND1-IT1Q9HBX3 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
SND1-IT1Q9HBX3 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SND1-IT1Q9HBX3 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SND1-IT1Q9HBX3 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
SND1-IT1Q9HBX3 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SND1-IT1Q9HBX3 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SND1-IT1Q9HBX3 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SND1-IT1Q9HBX3 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SND1-IT1Q9HBX3 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC14.14□□□□□ -0.15
SND1-IT1Q9HBX3 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC14.14□□□□□ -0.15
SND1-IT1Q9HBX3 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
SND1-IT1Q9HBX3 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SND1-IT1Q9HBX3 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SND1-IT1Q9HBX3 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SND1-IT1Q9HBX3 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SND1-IT1Q9HBX3 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SND1-IT1Q9HBX3 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SND1-IT1Q9HBX3 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SND1-IT1Q9HBX3 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SND1-IT1Q9HBX3 GUK1-208ENST00000366728 842 ntTSL 2 BASIC14.14□□□□□ -0.15
SND1-IT1Q9HBX3 YBX1P4-201ENST00000392794 808 ntBASIC14.14□□□□□ -0.15
SND1-IT1Q9HBX3 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SND1-IT1Q9HBX3 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
SND1-IT1Q9HBX3 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC14.14□□□□□ -0.15
SND1-IT1Q9HBX3 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SND1-IT1Q9HBX3 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
SND1-IT1Q9HBX3 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC14.14□□□□□ -0.15
SND1-IT1Q9HBX3 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SND1-IT1Q9HBX3 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SND1-IT1Q9HBX3 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC14.14□□□□□ -0.15
SND1-IT1Q9HBX3 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC14.14□□□□□ -0.15
SND1-IT1Q9HBX3 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
SND1-IT1Q9HBX3 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC14.14□□□□□ -0.15
SND1-IT1Q9HBX3 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
SND1-IT1Q9HBX3 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
SND1-IT1Q9HBX3 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SND1-IT1Q9HBX3 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
SND1-IT1Q9HBX3 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC14.13□□□□□ -0.15
SND1-IT1Q9HBX3 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
SND1-IT1Q9HBX3 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SND1-IT1Q9HBX3 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
SND1-IT1Q9HBX3 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SND1-IT1Q9HBX3 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SND1-IT1Q9HBX3 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SND1-IT1Q9HBX3 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC14.13□□□□□ -0.15
SND1-IT1Q9HBX3 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SND1-IT1Q9HBX3 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
SND1-IT1Q9HBX3 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC14.13□□□□□ -0.15
SND1-IT1Q9HBX3 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SND1-IT1Q9HBX3 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC14.13□□□□□ -0.15
SND1-IT1Q9HBX3 AC103724.3-201ENST00000564481 992 ntBASIC14.13□□□□□ -0.15
SND1-IT1Q9HBX3 TK2-216ENST00000564917 1156 ntTSL 3 BASIC14.13□□□□□ -0.15
SND1-IT1Q9HBX3 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SND1-IT1Q9HBX3 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC14.13□□□□□ -0.15
SND1-IT1Q9HBX3 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SND1-IT1Q9HBX3 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
SND1-IT1Q9HBX3 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC14.13□□□□□ -0.15
SND1-IT1Q9HBX3 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SND1-IT1Q9HBX3 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC14.13□□□□□ -0.15
SND1-IT1Q9HBX3 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SND1-IT1Q9HBX3 AC007952.6-201ENST00000573168 2673 ntBASIC14.12□□□□□ -0.15
SND1-IT1Q9HBX3 AC003957.1-201ENST00000625108 2673 ntBASIC14.12□□□□□ -0.15
SND1-IT1Q9HBX3 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC14.12□□□□□ -0.15
SND1-IT1Q9HBX3 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
SND1-IT1Q9HBX3 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SND1-IT1Q9HBX3 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SND1-IT1Q9HBX3 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
SND1-IT1Q9HBX3 AC103834.1-201ENST00000520383 144 ntBASIC14.12□□□□□ -0.15
SND1-IT1Q9HBX3 NKILA-201ENST00000613231 537 ntTSL 4 BASIC14.12□□□□□ -0.15
SND1-IT1Q9HBX3 KRT8P33-201ENST00000508125 1423 ntBASIC14.12□□□□□ -0.15
SND1-IT1Q9HBX3 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SND1-IT1Q9HBX3 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC14.12□□□□□ -0.15
SND1-IT1Q9HBX3 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SND1-IT1Q9HBX3 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SND1-IT1Q9HBX3 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SND1-IT1Q9HBX3 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
SND1-IT1Q9HBX3 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SND1-IT1Q9HBX3 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SND1-IT1Q9HBX3 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SND1-IT1Q9HBX3 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SND1-IT1Q9HBX3 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
SND1-IT1Q9HBX3 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC14.11□□□□□ -0.15
SND1-IT1Q9HBX3 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC14.11□□□□□ -0.15
SND1-IT1Q9HBX3 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SND1-IT1Q9HBX3 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms