Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
DDX47Q9H0S4 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
DDX47Q9H0S4 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
DDX47Q9H0S4 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
DDX47Q9H0S4 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
DDX47Q9H0S4 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
DDX47Q9H0S4 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC22.06■■□□□ 1.12
DDX47Q9H0S4 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
DDX47Q9H0S4 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
DDX47Q9H0S4 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
DDX47Q9H0S4 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
DDX47Q9H0S4 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
DDX47Q9H0S4 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
DDX47Q9H0S4 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
DDX47Q9H0S4 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
DDX47Q9H0S4 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC22.06■■□□□ 1.12
DDX47Q9H0S4 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
DDX47Q9H0S4 AC092667.1-201ENST00000434301 2586 ntBASIC22.06■■□□□ 1.12
DDX47Q9H0S4 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
DDX47Q9H0S4 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
DDX47Q9H0S4 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
DDX47Q9H0S4 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
DDX47Q9H0S4 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
DDX47Q9H0S4 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
DDX47Q9H0S4 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
DDX47Q9H0S4 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC22.05■■□□□ 1.12
DDX47Q9H0S4 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
DDX47Q9H0S4 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
DDX47Q9H0S4 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC22.05■■□□□ 1.12
DDX47Q9H0S4 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
DDX47Q9H0S4 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
DDX47Q9H0S4 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
DDX47Q9H0S4 PARN-205ENST00000539279 1557 ntTSL 2 BASIC22.05■■□□□ 1.12
DDX47Q9H0S4 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
DDX47Q9H0S4 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
DDX47Q9H0S4 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
DDX47Q9H0S4 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
DDX47Q9H0S4 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
DDX47Q9H0S4 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
DDX47Q9H0S4 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
DDX47Q9H0S4 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC22.04■■□□□ 1.12
DDX47Q9H0S4 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
DDX47Q9H0S4 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC22.04■■□□□ 1.12
DDX47Q9H0S4 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC22.04■■□□□ 1.12
DDX47Q9H0S4 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
DDX47Q9H0S4 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC22.04■■□□□ 1.12
DDX47Q9H0S4 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
DDX47Q9H0S4 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
DDX47Q9H0S4 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC22.04■■□□□ 1.12
DDX47Q9H0S4 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
DDX47Q9H0S4 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
DDX47Q9H0S4 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
DDX47Q9H0S4 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC22.04■■□□□ 1.12
DDX47Q9H0S4 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
DDX47Q9H0S4 GATM-206ENST00000558336 1522 ntTSL 2 BASIC22.04■■□□□ 1.12
DDX47Q9H0S4 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
DDX47Q9H0S4 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC22.03■■□□□ 1.12
DDX47Q9H0S4 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC22.03■■□□□ 1.12
DDX47Q9H0S4 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
DDX47Q9H0S4 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
DDX47Q9H0S4 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC22.03■■□□□ 1.12
DDX47Q9H0S4 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC22.03■■□□□ 1.12
DDX47Q9H0S4 PALM-207ENST00000590161 2137 ntTSL 4 BASIC22.03■■□□□ 1.12
DDX47Q9H0S4 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
DDX47Q9H0S4 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
DDX47Q9H0S4 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
DDX47Q9H0S4 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
DDX47Q9H0S4 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC22.03■■□□□ 1.12
DDX47Q9H0S4 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC22.03■■□□□ 1.12
DDX47Q9H0S4 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
DDX47Q9H0S4 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
DDX47Q9H0S4 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC22.03■■□□□ 1.12
DDX47Q9H0S4 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC22.03■■□□□ 1.12
DDX47Q9H0S4 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
DDX47Q9H0S4 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
DDX47Q9H0S4 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
DDX47Q9H0S4 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC22.02■■□□□ 1.12
DDX47Q9H0S4 KRT16P3-201ENST00000439127 1283 ntBASIC22.02■■□□□ 1.12
DDX47Q9H0S4 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
DDX47Q9H0S4 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
DDX47Q9H0S4 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
DDX47Q9H0S4 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
DDX47Q9H0S4 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC22.01■■□□□ 1.11
DDX47Q9H0S4 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC22.01■■□□□ 1.11
DDX47Q9H0S4 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
DDX47Q9H0S4 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
DDX47Q9H0S4 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
DDX47Q9H0S4 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
DDX47Q9H0S4 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
DDX47Q9H0S4 RASSF1-AS1-201ENST00000629828 790 ntBASIC22.01■■□□□ 1.11
DDX47Q9H0S4 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
DDX47Q9H0S4 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC22.01■■□□□ 1.11
DDX47Q9H0S4 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
DDX47Q9H0S4 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC22.01■■□□□ 1.11
DDX47Q9H0S4 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
DDX47Q9H0S4 AP004607.7-201ENST00000527152 1677 ntBASIC22.01■■□□□ 1.11
DDX47Q9H0S4 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
DDX47Q9H0S4 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
DDX47Q9H0S4 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC22■■□□□ 1.11
DDX47Q9H0S4 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms