Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC16.77■□□□□ 0.28
CHRDL1Q9BU40 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CHRDL1Q9BU40 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CHRDL1Q9BU40 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CHRDL1Q9BU40 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CHRDL1Q9BU40 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC16.77■□□□□ 0.28
CHRDL1Q9BU40 MIR4767-201ENST00000582827 78 ntBASIC16.77■□□□□ 0.28
CHRDL1Q9BU40 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC16.77■□□□□ 0.28
CHRDL1Q9BU40 AL136162.1-201ENST00000607711 1078 ntBASIC16.77■□□□□ 0.28
CHRDL1Q9BU40 AC087239.1-201ENST00000622671 572 ntBASIC16.77■□□□□ 0.28
CHRDL1Q9BU40 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CHRDL1Q9BU40 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
CHRDL1Q9BU40 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CHRDL1Q9BU40 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHRDL1Q9BU40 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CHRDL1Q9BU40 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CHRDL1Q9BU40 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHRDL1Q9BU40 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHRDL1Q9BU40 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC16.76■□□□□ 0.27
CHRDL1Q9BU40 AC010141.3-201ENST00000456659 717 ntBASIC16.76■□□□□ 0.27
CHRDL1Q9BU40 AC024257.2-201ENST00000549699 147 ntBASIC16.76■□□□□ 0.27
CHRDL1Q9BU40 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CHRDL1Q9BU40 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
CHRDL1Q9BU40 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC16.76■□□□□ 0.27
CHRDL1Q9BU40 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CHRDL1Q9BU40 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CHRDL1Q9BU40 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CHRDL1Q9BU40 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHRDL1Q9BU40 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
CHRDL1Q9BU40 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHRDL1Q9BU40 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHRDL1Q9BU40 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHRDL1Q9BU40 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHRDL1Q9BU40 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHRDL1Q9BU40 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
CHRDL1Q9BU40 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC16.75■□□□□ 0.27
CHRDL1Q9BU40 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHRDL1Q9BU40 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CHRDL1Q9BU40 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHRDL1Q9BU40 SNX3-202ENST00000349379 890 ntTSL 2 BASIC16.75■□□□□ 0.27
CHRDL1Q9BU40 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CHRDL1Q9BU40 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC16.75■□□□□ 0.27
CHRDL1Q9BU40 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHRDL1Q9BU40 AC026310.3-201ENST00000625186 2373 ntBASIC16.75■□□□□ 0.27
CHRDL1Q9BU40 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
CHRDL1Q9BU40 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC16.75■□□□□ 0.27
CHRDL1Q9BU40 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC16.75■□□□□ 0.27
CHRDL1Q9BU40 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHRDL1Q9BU40 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHRDL1Q9BU40 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHRDL1Q9BU40 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHRDL1Q9BU40 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC16.74■□□□□ 0.27
CHRDL1Q9BU40 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHRDL1Q9BU40 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHRDL1Q9BU40 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CHRDL1Q9BU40 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHRDL1Q9BU40 OR7E47P-201ENST00000546390 1422 ntBASIC16.74■□□□□ 0.27
CHRDL1Q9BU40 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC16.74■□□□□ 0.27
CHRDL1Q9BU40 AC096631.2-201ENST00000436136 790 ntBASIC16.74■□□□□ 0.27
CHRDL1Q9BU40 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHRDL1Q9BU40 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC16.74■□□□□ 0.27
CHRDL1Q9BU40 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CHRDL1Q9BU40 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHRDL1Q9BU40 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CHRDL1Q9BU40 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHRDL1Q9BU40 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC16.74■□□□□ 0.27
CHRDL1Q9BU40 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHRDL1Q9BU40 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHRDL1Q9BU40 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC16.73■□□□□ 0.27
CHRDL1Q9BU40 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHRDL1Q9BU40 AC135279.3-201ENST00000610945 1311 ntBASIC16.73■□□□□ 0.27
CHRDL1Q9BU40 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHRDL1Q9BU40 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC16.73■□□□□ 0.27
CHRDL1Q9BU40 FAM99A-202ENST00000538190 1989 ntBASIC16.73■□□□□ 0.27
CHRDL1Q9BU40 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC16.73■□□□□ 0.27
CHRDL1Q9BU40 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.73■□□□□ 0.27
CHRDL1Q9BU40 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHRDL1Q9BU40 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHRDL1Q9BU40 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC16.73■□□□□ 0.27
CHRDL1Q9BU40 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC16.73■□□□□ 0.27
CHRDL1Q9BU40 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC16.73■□□□□ 0.27
CHRDL1Q9BU40 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CHRDL1Q9BU40 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC16.73■□□□□ 0.27
CHRDL1Q9BU40 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CHRDL1Q9BU40 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHRDL1Q9BU40 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC16.72■□□□□ 0.27
CHRDL1Q9BU40 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHRDL1Q9BU40 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CHRDL1Q9BU40 OXCT2P1-201ENST00000447263 1535 ntBASIC16.72■□□□□ 0.27
CHRDL1Q9BU40 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHRDL1Q9BU40 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHRDL1Q9BU40 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
CHRDL1Q9BU40 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC16.72■□□□□ 0.27
CHRDL1Q9BU40 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CHRDL1Q9BU40 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC16.72■□□□□ 0.27
CHRDL1Q9BU40 AP005435.1-201ENST00000529293 1178 ntBASIC16.72■□□□□ 0.27
CHRDL1Q9BU40 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC16.72■□□□□ 0.27
CHRDL1Q9BU40 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHRDL1Q9BU40 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CHRDL1Q9BU40 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms