Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC22.54■■□□□ 1.2
PCDHB18PQ96TA0 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHB18PQ96TA0 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC22.53■■□□□ 1.2
PCDHB18PQ96TA0 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHB18PQ96TA0 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
PCDHB18PQ96TA0 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC22.53■■□□□ 1.2
PCDHB18PQ96TA0 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC22.53■■□□□ 1.2
PCDHB18PQ96TA0 STOX2-205ENST00000513034 807 ntTSL 3 BASIC22.53■■□□□ 1.2
PCDHB18PQ96TA0 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC22.53■■□□□ 1.2
PCDHB18PQ96TA0 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC22.53■■□□□ 1.2
PCDHB18PQ96TA0 RALB-208ENST00000631312 311 ntTSL 5 BASIC22.53■■□□□ 1.2
PCDHB18PQ96TA0 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHB18PQ96TA0 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
PCDHB18PQ96TA0 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
PCDHB18PQ96TA0 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC22.53■■□□□ 1.2
PCDHB18PQ96TA0 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHB18PQ96TA0 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHB18PQ96TA0 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHB18PQ96TA0 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHB18PQ96TA0 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHB18PQ96TA0 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHB18PQ96TA0 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHB18PQ96TA0 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
PCDHB18PQ96TA0 MFF-208ENST00000409616 1247 ntTSL 5 BASIC22.52■■□□□ 1.2
PCDHB18PQ96TA0 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC22.52■■□□□ 1.2
PCDHB18PQ96TA0 AC005837.3-201ENST00000612163 286 ntBASIC22.52■■□□□ 1.2
PCDHB18PQ96TA0 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC22.52■■□□□ 1.2
PCDHB18PQ96TA0 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHB18PQ96TA0 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC22.52■■□□□ 1.2
PCDHB18PQ96TA0 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC22.52■■□□□ 1.2
PCDHB18PQ96TA0 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHB18PQ96TA0 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
PCDHB18PQ96TA0 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
PCDHB18PQ96TA0 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHB18PQ96TA0 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHB18PQ96TA0 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
PCDHB18PQ96TA0 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHB18PQ96TA0 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHB18PQ96TA0 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHB18PQ96TA0 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHB18PQ96TA0 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC22.51■■□□□ 1.19
PCDHB18PQ96TA0 AC012414.1-201ENST00000556676 535 ntBASIC22.51■■□□□ 1.19
PCDHB18PQ96TA0 AC142381.2-201ENST00000566120 298 ntBASIC22.51■■□□□ 1.19
PCDHB18PQ96TA0 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC22.51■■□□□ 1.19
PCDHB18PQ96TA0 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
PCDHB18PQ96TA0 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
PCDHB18PQ96TA0 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHB18PQ96TA0 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHB18PQ96TA0 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHB18PQ96TA0 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHB18PQ96TA0 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHB18PQ96TA0 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
PCDHB18PQ96TA0 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC22.5■■□□□ 1.19
PCDHB18PQ96TA0 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHB18PQ96TA0 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC22.5■■□□□ 1.19
PCDHB18PQ96TA0 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC22.5■■□□□ 1.19
PCDHB18PQ96TA0 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC22.5■■□□□ 1.19
PCDHB18PQ96TA0 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHB18PQ96TA0 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHB18PQ96TA0 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHB18PQ96TA0 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHB18PQ96TA0 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHB18PQ96TA0 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHB18PQ96TA0 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHB18PQ96TA0 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHB18PQ96TA0 HYI-206ENST00000372434 1025 ntTSL 5 BASIC22.49■■□□□ 1.19
PCDHB18PQ96TA0 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC22.49■■□□□ 1.19
PCDHB18PQ96TA0 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
PCDHB18PQ96TA0 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC22.49■■□□□ 1.19
PCDHB18PQ96TA0 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC22.49■■□□□ 1.19
PCDHB18PQ96TA0 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHB18PQ96TA0 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC22.49■■□□□ 1.19
PCDHB18PQ96TA0 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC22.49■■□□□ 1.19
PCDHB18PQ96TA0 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHB18PQ96TA0 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHB18PQ96TA0 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC22.49■■□□□ 1.19
PCDHB18PQ96TA0 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHB18PQ96TA0 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC22.49■■□□□ 1.19
PCDHB18PQ96TA0 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHB18PQ96TA0 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC22.48■■□□□ 1.19
PCDHB18PQ96TA0 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC22.48■■□□□ 1.19
PCDHB18PQ96TA0 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHB18PQ96TA0 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHB18PQ96TA0 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHB18PQ96TA0 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHB18PQ96TA0 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHB18PQ96TA0 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHB18PQ96TA0 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHB18PQ96TA0 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHB18PQ96TA0 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHB18PQ96TA0 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC22.47■■□□□ 1.19
PCDHB18PQ96TA0 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC22.47■■□□□ 1.19
PCDHB18PQ96TA0 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHB18PQ96TA0 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHB18PQ96TA0 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC22.47■■□□□ 1.19
PCDHB18PQ96TA0 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHB18PQ96TA0 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHB18PQ96TA0 RHOF-204ENST00000537265 699 ntTSL 2 BASIC22.47■■□□□ 1.19
PCDHB18PQ96TA0 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
PCDHB18PQ96TA0 NARF-205ENST00000412079 1760 ntTSL 5 BASIC22.47■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms