Protein–RNA interactions for Protein: Q92947

GCDH, Glutaryl-CoA dehydrogenase, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCDHQ92947 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
GCDHQ92947 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
GCDHQ92947 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
GCDHQ92947 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.55■□□□□ 0.56
GCDHQ92947 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
GCDHQ92947 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
GCDHQ92947 LINC01006-201ENST00000333319 2292 ntBASIC18.54■□□□□ 0.56
GCDHQ92947 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GCDHQ92947 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GCDHQ92947 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
GCDHQ92947 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
GCDHQ92947 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
GCDHQ92947 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
GCDHQ92947 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
GCDHQ92947 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GCDHQ92947 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
GCDHQ92947 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
GCDHQ92947 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
GCDHQ92947 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.54■□□□□ 0.56
GCDHQ92947 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.54■□□□□ 0.56
GCDHQ92947 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.54■□□□□ 0.56
GCDHQ92947 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GCDHQ92947 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
GCDHQ92947 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
GCDHQ92947 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GCDHQ92947 REST-206ENST00000612429 1376 ntTSL 5 BASIC18.54■□□□□ 0.56
GCDHQ92947 REST-207ENST00000616975 1370 ntTSL 5 BASIC18.54■□□□□ 0.56
GCDHQ92947 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
GCDHQ92947 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.54■□□□□ 0.56
GCDHQ92947 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GCDHQ92947 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
GCDHQ92947 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
GCDHQ92947 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
GCDHQ92947 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
GCDHQ92947 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
GCDHQ92947 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.53■□□□□ 0.56
GCDHQ92947 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.53■□□□□ 0.56
GCDHQ92947 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
GCDHQ92947 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC18.53■□□□□ 0.56
GCDHQ92947 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.53■□□□□ 0.56
GCDHQ92947 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
GCDHQ92947 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
GCDHQ92947 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.53■□□□□ 0.56
GCDHQ92947 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.53■□□□□ 0.56
GCDHQ92947 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
GCDHQ92947 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
GCDHQ92947 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
GCDHQ92947 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
GCDHQ92947 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
GCDHQ92947 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
GCDHQ92947 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
GCDHQ92947 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
GCDHQ92947 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.52■□□□□ 0.56
GCDHQ92947 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
GCDHQ92947 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
GCDHQ92947 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
GCDHQ92947 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
GCDHQ92947 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
GCDHQ92947 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
GCDHQ92947 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.52■□□□□ 0.56
GCDHQ92947 CLTA-206ENST00000466396 695 ntTSL 2 BASIC18.52■□□□□ 0.56
GCDHQ92947 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.52■□□□□ 0.56
GCDHQ92947 DUX4L19-201ENST00000557448 1267 ntBASIC18.52■□□□□ 0.56
GCDHQ92947 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.52■□□□□ 0.56
GCDHQ92947 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
GCDHQ92947 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
GCDHQ92947 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
GCDHQ92947 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
GCDHQ92947 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
GCDHQ92947 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.51■□□□□ 0.55
GCDHQ92947 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GCDHQ92947 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GCDHQ92947 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
GCDHQ92947 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GCDHQ92947 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GCDHQ92947 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GCDHQ92947 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
GCDHQ92947 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC18.51■□□□□ 0.55
GCDHQ92947 AF213884.3-201ENST00000563833 479 ntBASIC18.51■□□□□ 0.55
GCDHQ92947 SNX5-217ENST00000606557 1087 ntBASIC18.51■□□□□ 0.55
GCDHQ92947 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.51■□□□□ 0.55
GCDHQ92947 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GCDHQ92947 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC18.51■□□□□ 0.55
GCDHQ92947 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
GCDHQ92947 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
GCDHQ92947 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
GCDHQ92947 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GCDHQ92947 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
GCDHQ92947 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
GCDHQ92947 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GCDHQ92947 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
GCDHQ92947 AC004687.1-201ENST00000579003 1625 ntBASIC18.5■□□□□ 0.55
GCDHQ92947 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
GCDHQ92947 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GCDHQ92947 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GCDHQ92947 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GCDHQ92947 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.5■□□□□ 0.55
GCDHQ92947 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.5■□□□□ 0.55
GCDHQ92947 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
GCDHQ92947 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms