Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 MFF-207ENST00000409565 1548 ntTSL 2 BASIC17.24■□□□□ 0.35
LINC00311Q8N616 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC17.24■□□□□ 0.35
LINC00311Q8N616 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LINC00311Q8N616 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LINC00311Q8N616 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
LINC00311Q8N616 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LINC00311Q8N616 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
LINC00311Q8N616 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC17.24■□□□□ 0.35
LINC00311Q8N616 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LINC00311Q8N616 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
LINC00311Q8N616 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LINC00311Q8N616 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LINC00311Q8N616 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LINC00311Q8N616 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LINC00311Q8N616 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LINC00311Q8N616 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LINC00311Q8N616 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LINC00311Q8N616 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LINC00311Q8N616 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LINC00311Q8N616 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC17.23■□□□□ 0.35
LINC00311Q8N616 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC17.23■□□□□ 0.35
LINC00311Q8N616 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LINC00311Q8N616 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
LINC00311Q8N616 JTB-203ENST00000368589 1216 ntTSL 2 BASIC17.23■□□□□ 0.35
LINC00311Q8N616 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LINC00311Q8N616 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LINC00311Q8N616 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LINC00311Q8N616 EEF1DP3-203ENST00000566025 782 ntBASIC17.23■□□□□ 0.35
LINC00311Q8N616 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
LINC00311Q8N616 CLDN5-201ENST00000403084 2357 ntBASIC17.23■□□□□ 0.35
LINC00311Q8N616 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC17.23■□□□□ 0.35
LINC00311Q8N616 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LINC00311Q8N616 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LINC00311Q8N616 AC026310.3-201ENST00000625186 2373 ntBASIC17.22■□□□□ 0.35
LINC00311Q8N616 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LINC00311Q8N616 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LINC00311Q8N616 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
LINC00311Q8N616 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.22■□□□□ 0.35
LINC00311Q8N616 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC17.22■□□□□ 0.35
LINC00311Q8N616 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC17.22■□□□□ 0.35
LINC00311Q8N616 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC17.22■□□□□ 0.35
LINC00311Q8N616 AC053503.5-201ENST00000601508 636 ntBASIC17.22■□□□□ 0.35
LINC00311Q8N616 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LINC00311Q8N616 LINC02228-203ENST00000641970 1355 ntBASIC17.22■□□□□ 0.35
LINC00311Q8N616 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LINC00311Q8N616 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LINC00311Q8N616 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LINC00311Q8N616 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.22■□□□□ 0.35
LINC00311Q8N616 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LINC00311Q8N616 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC17.22■□□□□ 0.35
LINC00311Q8N616 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LINC00311Q8N616 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LINC00311Q8N616 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LINC00311Q8N616 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LINC00311Q8N616 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LINC00311Q8N616 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LINC00311Q8N616 YBX1P1-201ENST00000445822 960 ntBASIC17.21■□□□□ 0.35
LINC00311Q8N616 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC17.21■□□□□ 0.35
LINC00311Q8N616 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LINC00311Q8N616 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC17.21■□□□□ 0.35
LINC00311Q8N616 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LINC00311Q8N616 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
LINC00311Q8N616 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LINC00311Q8N616 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LINC00311Q8N616 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC17.21■□□□□ 0.34
LINC00311Q8N616 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
LINC00311Q8N616 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LINC00311Q8N616 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LINC00311Q8N616 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LINC00311Q8N616 PARN-205ENST00000539279 1557 ntTSL 2 BASIC17.2■□□□□ 0.34
LINC00311Q8N616 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LINC00311Q8N616 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LINC00311Q8N616 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
LINC00311Q8N616 ZNRF2P3-201ENST00000424200 374 ntBASIC17.2■□□□□ 0.34
LINC00311Q8N616 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LINC00311Q8N616 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC17.2■□□□□ 0.34
LINC00311Q8N616 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
LINC00311Q8N616 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LINC00311Q8N616 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LINC00311Q8N616 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LINC00311Q8N616 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LINC00311Q8N616 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LINC00311Q8N616 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LINC00311Q8N616 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
LINC00311Q8N616 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LINC00311Q8N616 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC17.2■□□□□ 0.34
LINC00311Q8N616 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
LINC00311Q8N616 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.19■□□□□ 0.34
LINC00311Q8N616 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LINC00311Q8N616 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LINC00311Q8N616 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LINC00311Q8N616 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.19■□□□□ 0.34
LINC00311Q8N616 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC17.19■□□□□ 0.34
LINC00311Q8N616 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LINC00311Q8N616 AC079140.4-201ENST00000507448 529 ntBASIC17.19■□□□□ 0.34
LINC00311Q8N616 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC17.19■□□□□ 0.34
LINC00311Q8N616 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LINC00311Q8N616 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LINC00311Q8N616 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LINC00311Q8N616 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms