Protein–RNA interactions for Protein: Q5VXM1

CDCP2, CUB domain-containing protein 2, humanhuman

Predictions only

Length 449 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP2Q5VXM1 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.28■□□□□ 0.84
CDCP2Q5VXM1 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDCP2Q5VXM1 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDCP2Q5VXM1 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDCP2Q5VXM1 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CDCP2Q5VXM1 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDCP2Q5VXM1 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
CDCP2Q5VXM1 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDCP2Q5VXM1 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.27■□□□□ 0.84
CDCP2Q5VXM1 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDCP2Q5VXM1 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.27■□□□□ 0.84
CDCP2Q5VXM1 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDCP2Q5VXM1 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDCP2Q5VXM1 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.27■□□□□ 0.84
CDCP2Q5VXM1 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.27■□□□□ 0.84
CDCP2Q5VXM1 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.27■□□□□ 0.84
CDCP2Q5VXM1 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.27■□□□□ 0.84
CDCP2Q5VXM1 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.27■□□□□ 0.84
CDCP2Q5VXM1 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
CDCP2Q5VXM1 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDCP2Q5VXM1 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.27■□□□□ 0.84
CDCP2Q5VXM1 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDCP2Q5VXM1 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.83
CDCP2Q5VXM1 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CDCP2Q5VXM1 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
CDCP2Q5VXM1 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.26■□□□□ 0.83
CDCP2Q5VXM1 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.26■□□□□ 0.83
CDCP2Q5VXM1 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.26■□□□□ 0.83
CDCP2Q5VXM1 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CDCP2Q5VXM1 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CDCP2Q5VXM1 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.26■□□□□ 0.83
CDCP2Q5VXM1 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.26■□□□□ 0.83
CDCP2Q5VXM1 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.26■□□□□ 0.83
CDCP2Q5VXM1 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
CDCP2Q5VXM1 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
CDCP2Q5VXM1 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDCP2Q5VXM1 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.25■□□□□ 0.83
CDCP2Q5VXM1 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDCP2Q5VXM1 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDCP2Q5VXM1 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CDCP2Q5VXM1 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.25■□□□□ 0.83
CDCP2Q5VXM1 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.25■□□□□ 0.83
CDCP2Q5VXM1 AC006058.3-201ENST00000606217 1069 ntBASIC20.25■□□□□ 0.83
CDCP2Q5VXM1 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.25■□□□□ 0.83
CDCP2Q5VXM1 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CDCP2Q5VXM1 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDCP2Q5VXM1 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CDCP2Q5VXM1 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDCP2Q5VXM1 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDCP2Q5VXM1 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDCP2Q5VXM1 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDCP2Q5VXM1 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDCP2Q5VXM1 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDCP2Q5VXM1 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.24■□□□□ 0.83
CDCP2Q5VXM1 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.24■□□□□ 0.83
CDCP2Q5VXM1 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CDCP2Q5VXM1 AC128676.1-201ENST00000454392 318 ntBASIC20.24■□□□□ 0.83
CDCP2Q5VXM1 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.24■□□□□ 0.83
CDCP2Q5VXM1 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.24■□□□□ 0.83
CDCP2Q5VXM1 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CDCP2Q5VXM1 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.24■□□□□ 0.83
CDCP2Q5VXM1 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDCP2Q5VXM1 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.24■□□□□ 0.83
CDCP2Q5VXM1 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDCP2Q5VXM1 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.24■□□□□ 0.83
CDCP2Q5VXM1 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.24■□□□□ 0.83
CDCP2Q5VXM1 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDCP2Q5VXM1 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.23■□□□□ 0.83
CDCP2Q5VXM1 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDCP2Q5VXM1 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDCP2Q5VXM1 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDCP2Q5VXM1 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDCP2Q5VXM1 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDCP2Q5VXM1 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.23■□□□□ 0.83
CDCP2Q5VXM1 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.23■□□□□ 0.83
CDCP2Q5VXM1 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CDCP2Q5VXM1 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDCP2Q5VXM1 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDCP2Q5VXM1 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.23■□□□□ 0.83
CDCP2Q5VXM1 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.23■□□□□ 0.83
CDCP2Q5VXM1 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDCP2Q5VXM1 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDCP2Q5VXM1 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.22■□□□□ 0.83
CDCP2Q5VXM1 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDCP2Q5VXM1 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDCP2Q5VXM1 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.22■□□□□ 0.83
CDCP2Q5VXM1 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.22■□□□□ 0.83
CDCP2Q5VXM1 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.22■□□□□ 0.83
CDCP2Q5VXM1 AC142381.4-202ENST00000563973 229 ntBASIC20.22■□□□□ 0.83
CDCP2Q5VXM1 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.22■□□□□ 0.83
CDCP2Q5VXM1 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.22■□□□□ 0.83
CDCP2Q5VXM1 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDCP2Q5VXM1 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDCP2Q5VXM1 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.22■□□□□ 0.83
CDCP2Q5VXM1 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.22■□□□□ 0.83
CDCP2Q5VXM1 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDCP2Q5VXM1 AC137767.1-201ENST00000602918 1920 ntBASIC20.21■□□□□ 0.83
CDCP2Q5VXM1 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDCP2Q5VXM1 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDCP2Q5VXM1 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms