Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.33■□□□□ 0.52
ATPAF1Q5TC12 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.32■□□□□ 0.52
ATPAF1Q5TC12 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.32■□□□□ 0.52
ATPAF1Q5TC12 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ATPAF1Q5TC12 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATPAF1Q5TC12 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ATPAF1Q5TC12 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATPAF1Q5TC12 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ATPAF1Q5TC12 AP005435.1-201ENST00000529293 1178 ntBASIC18.32■□□□□ 0.52
ATPAF1Q5TC12 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
ATPAF1Q5TC12 AL031432.3-201ENST00000607698 485 ntBASIC18.32■□□□□ 0.52
ATPAF1Q5TC12 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
ATPAF1Q5TC12 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.32■□□□□ 0.52
ATPAF1Q5TC12 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
ATPAF1Q5TC12 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
ATPAF1Q5TC12 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATPAF1Q5TC12 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATPAF1Q5TC12 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
ATPAF1Q5TC12 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATPAF1Q5TC12 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
ATPAF1Q5TC12 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATPAF1Q5TC12 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATPAF1Q5TC12 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
ATPAF1Q5TC12 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ATPAF1Q5TC12 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ATPAF1Q5TC12 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ATPAF1Q5TC12 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATPAF1Q5TC12 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATPAF1Q5TC12 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATPAF1Q5TC12 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.31■□□□□ 0.52
ATPAF1Q5TC12 SLC47A1P1-202ENST00000449666 945 ntBASIC18.31■□□□□ 0.52
ATPAF1Q5TC12 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.31■□□□□ 0.52
ATPAF1Q5TC12 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.31■□□□□ 0.52
ATPAF1Q5TC12 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.31■□□□□ 0.52
ATPAF1Q5TC12 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.31■□□□□ 0.52
ATPAF1Q5TC12 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATPAF1Q5TC12 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.31■□□□□ 0.52
ATPAF1Q5TC12 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
ATPAF1Q5TC12 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATPAF1Q5TC12 LINC01521-201ENST00000504184 1943 ntBASIC18.31■□□□□ 0.52
ATPAF1Q5TC12 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ATPAF1Q5TC12 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATPAF1Q5TC12 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATPAF1Q5TC12 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATPAF1Q5TC12 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.3■□□□□ 0.52
ATPAF1Q5TC12 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.3■□□□□ 0.52
ATPAF1Q5TC12 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ATPAF1Q5TC12 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ATPAF1Q5TC12 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ATPAF1Q5TC12 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
ATPAF1Q5TC12 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
ATPAF1Q5TC12 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ATPAF1Q5TC12 SUDS3P1-201ENST00000505831 966 ntBASIC18.3■□□□□ 0.52
ATPAF1Q5TC12 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ATPAF1Q5TC12 AC010525.1-201ENST00000585559 441 ntBASIC18.3■□□□□ 0.52
ATPAF1Q5TC12 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ATPAF1Q5TC12 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.3■□□□□ 0.52
ATPAF1Q5TC12 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
ATPAF1Q5TC12 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.3■□□□□ 0.52
ATPAF1Q5TC12 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
ATPAF1Q5TC12 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATPAF1Q5TC12 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ATPAF1Q5TC12 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATPAF1Q5TC12 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.3■□□□□ 0.52
ATPAF1Q5TC12 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATPAF1Q5TC12 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.3■□□□□ 0.52
ATPAF1Q5TC12 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATPAF1Q5TC12 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATPAF1Q5TC12 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATPAF1Q5TC12 LINC01960-201ENST00000563759 1884 ntBASIC18.29■□□□□ 0.52
ATPAF1Q5TC12 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.29■□□□□ 0.52
ATPAF1Q5TC12 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATPAF1Q5TC12 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATPAF1Q5TC12 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
ATPAF1Q5TC12 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ATPAF1Q5TC12 MIR638-201ENST00000385237 100 ntBASIC18.29■□□□□ 0.52
ATPAF1Q5TC12 AC027682.1-201ENST00000562846 899 ntBASIC18.29■□□□□ 0.52
ATPAF1Q5TC12 AC005837.3-201ENST00000612163 286 ntBASIC18.29■□□□□ 0.52
ATPAF1Q5TC12 AL136967.2-201ENST00000623968 743 ntBASIC18.29■□□□□ 0.52
ATPAF1Q5TC12 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.29■□□□□ 0.52
ATPAF1Q5TC12 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
ATPAF1Q5TC12 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.29■□□□□ 0.52
ATPAF1Q5TC12 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
ATPAF1Q5TC12 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATPAF1Q5TC12 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATPAF1Q5TC12 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.28■□□□□ 0.52
ATPAF1Q5TC12 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
ATPAF1Q5TC12 Z98882.1-201ENST00000622160 2253 ntBASIC18.28■□□□□ 0.52
ATPAF1Q5TC12 AF106564.1-201ENST00000607058 2553 ntBASIC18.28■□□□□ 0.52
ATPAF1Q5TC12 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATPAF1Q5TC12 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATPAF1Q5TC12 MIR939-201ENST00000401314 82 ntBASIC18.28■□□□□ 0.52
ATPAF1Q5TC12 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.28■□□□□ 0.52
ATPAF1Q5TC12 AP001330.3-201ENST00000520123 633 ntBASIC18.28■□□□□ 0.52
ATPAF1Q5TC12 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
ATPAF1Q5TC12 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.28■□□□□ 0.52
ATPAF1Q5TC12 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ATPAF1Q5TC12 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ATPAF1Q5TC12 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.28■□□□□ 0.52
ATPAF1Q5TC12 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms