Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HMGA2P52926 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HMGA2P52926 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.39■□□□□ 0.69
HMGA2P52926 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.39■□□□□ 0.69
HMGA2P52926 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.39■□□□□ 0.69
HMGA2P52926 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.39■□□□□ 0.69
HMGA2P52926 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
HMGA2P52926 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.39■□□□□ 0.69
HMGA2P52926 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
HMGA2P52926 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HMGA2P52926 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
HMGA2P52926 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HMGA2P52926 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
HMGA2P52926 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
HMGA2P52926 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
HMGA2P52926 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HMGA2P52926 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HMGA2P52926 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.38■□□□□ 0.69
HMGA2P52926 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.38■□□□□ 0.69
HMGA2P52926 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.38■□□□□ 0.69
HMGA2P52926 SRD5A1P1-201ENST00000442297 786 ntBASIC19.38■□□□□ 0.69
HMGA2P52926 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.38■□□□□ 0.69
HMGA2P52926 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.38■□□□□ 0.69
HMGA2P52926 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HMGA2P52926 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HMGA2P52926 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.38■□□□□ 0.69
HMGA2P52926 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.38■□□□□ 0.69
HMGA2P52926 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.38■□□□□ 0.69
HMGA2P52926 AL138724.1-201ENST00000606771 1088 ntBASIC19.38■□□□□ 0.69
HMGA2P52926 GABARAPL3-202ENST00000624044 1851 ntBASIC19.38■□□□□ 0.69
HMGA2P52926 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HMGA2P52926 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
HMGA2P52926 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
HMGA2P52926 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.37■□□□□ 0.69
HMGA2P52926 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
HMGA2P52926 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HMGA2P52926 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HMGA2P52926 AC006128.1-201ENST00000624704 1661 ntBASIC19.37■□□□□ 0.69
HMGA2P52926 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HMGA2P52926 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HMGA2P52926 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
HMGA2P52926 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HMGA2P52926 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
HMGA2P52926 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
HMGA2P52926 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HMGA2P52926 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.37■□□□□ 0.69
HMGA2P52926 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HMGA2P52926 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.36■□□□□ 0.69
HMGA2P52926 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.36■□□□□ 0.69
HMGA2P52926 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HMGA2P52926 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.36■□□□□ 0.69
HMGA2P52926 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HMGA2P52926 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
HMGA2P52926 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.36■□□□□ 0.69
HMGA2P52926 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HMGA2P52926 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HMGA2P52926 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HMGA2P52926 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.36■□□□□ 0.69
HMGA2P52926 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.36■□□□□ 0.69
HMGA2P52926 AP006587.3-201ENST00000525742 1516 ntBASIC19.35■□□□□ 0.69
HMGA2P52926 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HMGA2P52926 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HMGA2P52926 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.35■□□□□ 0.69
HMGA2P52926 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HMGA2P52926 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.35■□□□□ 0.69
HMGA2P52926 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.35■□□□□ 0.69
HMGA2P52926 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
HMGA2P52926 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.35■□□□□ 0.69
HMGA2P52926 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.35■□□□□ 0.69
HMGA2P52926 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
HMGA2P52926 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HMGA2P52926 AP005212.1-201ENST00000581547 1997 ntBASIC19.35■□□□□ 0.69
HMGA2P52926 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HMGA2P52926 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HMGA2P52926 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HMGA2P52926 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.35■□□□□ 0.69
HMGA2P52926 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HMGA2P52926 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HMGA2P52926 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.34■□□□□ 0.69
HMGA2P52926 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.34■□□□□ 0.69
HMGA2P52926 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.34■□□□□ 0.69
HMGA2P52926 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.34■□□□□ 0.69
HMGA2P52926 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
HMGA2P52926 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
HMGA2P52926 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HMGA2P52926 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.34■□□□□ 0.69
HMGA2P52926 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.34■□□□□ 0.69
HMGA2P52926 AL512631.2-201ENST00000604634 923 ntBASIC19.34■□□□□ 0.69
HMGA2P52926 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.34■□□□□ 0.69
HMGA2P52926 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HMGA2P52926 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
HMGA2P52926 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HMGA2P52926 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
HMGA2P52926 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.34■□□□□ 0.69
HMGA2P52926 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.34■□□□□ 0.69
HMGA2P52926 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HMGA2P52926 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HMGA2P52926 PLK5-205ENST00000642079 1969 ntBASIC19.33■□□□□ 0.69
HMGA2P52926 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
HMGA2P52926 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms