Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCP4P48539 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCP4P48539 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
PCP4P48539 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCP4P48539 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PCP4P48539 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC14.79□□□□□ -0.04
PCP4P48539 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PCP4P48539 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PCP4P48539 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
PCP4P48539 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCP4P48539 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PCP4P48539 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCP4P48539 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCP4P48539 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PCP4P48539 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCP4P48539 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCP4P48539 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCP4P48539 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCP4P48539 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCP4P48539 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCP4P48539 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
PCP4P48539 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC14.78□□□□□ -0.04
PCP4P48539 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
PCP4P48539 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PCP4P48539 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC14.78□□□□□ -0.04
PCP4P48539 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.78□□□□□ -0.04
PCP4P48539 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC14.78□□□□□ -0.04
PCP4P48539 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCP4P48539 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCP4P48539 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
PCP4P48539 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
PCP4P48539 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PCP4P48539 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PCP4P48539 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
PCP4P48539 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
PCP4P48539 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
PCP4P48539 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PCP4P48539 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PCP4P48539 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PCP4P48539 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
PCP4P48539 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
PCP4P48539 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PCP4P48539 AL162727.3-201ENST00000635661 2787 ntBASIC14.77□□□□□ -0.05
PCP4P48539 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PCP4P48539 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC14.77□□□□□ -0.05
PCP4P48539 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCP4P48539 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCP4P48539 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCP4P48539 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCP4P48539 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PCP4P48539 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
PCP4P48539 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCP4P48539 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCP4P48539 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCP4P48539 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
PCP4P48539 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCP4P48539 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCP4P48539 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCP4P48539 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PCP4P48539 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCP4P48539 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC14.75□□□□□ -0.05
PCP4P48539 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PCP4P48539 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCP4P48539 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCP4P48539 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCP4P48539 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PCP4P48539 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
PCP4P48539 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PCP4P48539 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCP4P48539 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCP4P48539 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCP4P48539 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCP4P48539 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCP4P48539 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCP4P48539 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PCP4P48539 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCP4P48539 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC14.74□□□□□ -0.05
PCP4P48539 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PCP4P48539 CEP83-AS1-201ENST00000623122 2482 ntBASIC14.74□□□□□ -0.05
PCP4P48539 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCP4P48539 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PCP4P48539 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCP4P48539 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCP4P48539 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
PCP4P48539 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCP4P48539 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PCP4P48539 AL662844.4-201ENST00000606367 2838 ntBASIC14.74□□□□□ -0.05
PCP4P48539 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCP4P48539 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC14.74□□□□□ -0.05
PCP4P48539 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC14.74□□□□□ -0.05
PCP4P48539 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCP4P48539 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
PCP4P48539 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCP4P48539 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC14.74□□□□□ -0.05
PCP4P48539 AP003733.4-201ENST00000623785 1697 ntBASIC14.74□□□□□ -0.05
PCP4P48539 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCP4P48539 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC14.74□□□□□ -0.05
PCP4P48539 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCP4P48539 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCP4P48539 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms