Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 AL136162.1-201ENST00000607711 1078 ntBASIC21.23■□□□□ 0.99
CCND1P24385 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
CCND1P24385 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCND1P24385 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.23■□□□□ 0.99
CCND1P24385 AC135279.3-201ENST00000610945 1311 ntBASIC21.23■□□□□ 0.99
CCND1P24385 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
CCND1P24385 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
CCND1P24385 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.23■□□□□ 0.99
CCND1P24385 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CCND1P24385 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
CCND1P24385 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC21.22■□□□□ 0.99
CCND1P24385 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCND1P24385 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCND1P24385 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.22■□□□□ 0.99
CCND1P24385 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
CCND1P24385 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCND1P24385 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCND1P24385 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCND1P24385 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCND1P24385 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.22■□□□□ 0.99
CCND1P24385 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCND1P24385 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCND1P24385 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCND1P24385 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CCND1P24385 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCND1P24385 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.21■□□□□ 0.99
CCND1P24385 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.21■□□□□ 0.99
CCND1P24385 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCND1P24385 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCND1P24385 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCND1P24385 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCND1P24385 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CCND1P24385 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.21■□□□□ 0.99
CCND1P24385 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.21■□□□□ 0.99
CCND1P24385 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.21■□□□□ 0.99
CCND1P24385 AL031602.1-201ENST00000633169 911 ntBASIC21.21■□□□□ 0.99
CCND1P24385 AC244015.2-201ENST00000616358 1861 ntBASIC21.21■□□□□ 0.99
CCND1P24385 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCND1P24385 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CCND1P24385 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCND1P24385 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCND1P24385 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.21■□□□□ 0.99
CCND1P24385 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.21■□□□□ 0.99
CCND1P24385 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.2■□□□□ 0.99
CCND1P24385 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCND1P24385 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCND1P24385 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.2■□□□□ 0.98
CCND1P24385 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCND1P24385 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCND1P24385 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCND1P24385 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CCND1P24385 AC096631.2-201ENST00000436136 790 ntBASIC21.2■□□□□ 0.98
CCND1P24385 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.2■□□□□ 0.98
CCND1P24385 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.2■□□□□ 0.98
CCND1P24385 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCND1P24385 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
CCND1P24385 AC087742.1-201ENST00000575880 1738 ntBASIC21.2■□□□□ 0.98
CCND1P24385 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.19■□□□□ 0.98
CCND1P24385 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCND1P24385 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCND1P24385 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCND1P24385 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.19■□□□□ 0.98
CCND1P24385 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
CCND1P24385 AC024257.2-201ENST00000549699 147 ntBASIC21.19■□□□□ 0.98
CCND1P24385 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.19■□□□□ 0.98
CCND1P24385 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCND1P24385 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCND1P24385 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC21.19■□□□□ 0.98
CCND1P24385 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCND1P24385 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCND1P24385 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
CCND1P24385 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCND1P24385 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCND1P24385 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.18■□□□□ 0.98
CCND1P24385 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCND1P24385 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCND1P24385 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCND1P24385 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCND1P24385 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.18■□□□□ 0.98
CCND1P24385 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCND1P24385 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.18■□□□□ 0.98
CCND1P24385 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCND1P24385 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.18■□□□□ 0.98
CCND1P24385 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.18■□□□□ 0.98
CCND1P24385 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.18■□□□□ 0.98
CCND1P24385 MIR4767-201ENST00000582827 78 ntBASIC21.18■□□□□ 0.98
CCND1P24385 CA15P2-201ENST00000611168 834 ntBASIC21.18■□□□□ 0.98
CCND1P24385 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.18■□□□□ 0.98
CCND1P24385 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.18■□□□□ 0.98
CCND1P24385 AC106739.1-201ENST00000617035 715 ntBASIC21.18■□□□□ 0.98
CCND1P24385 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.18■□□□□ 0.98
CCND1P24385 AC087239.1-201ENST00000622671 572 ntBASIC21.18■□□□□ 0.98
CCND1P24385 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCND1P24385 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCND1P24385 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCND1P24385 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.18■□□□□ 0.98
CCND1P24385 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCND1P24385 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.18■□□□□ 0.98
CCND1P24385 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCND1P24385 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms