Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC28.34■■■□□ 2.13
COL5A2P05997 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC28.34■■■□□ 2.13
COL5A2P05997 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
COL5A2P05997 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC28.34■■■□□ 2.13
COL5A2P05997 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC28.34■■■□□ 2.13
COL5A2P05997 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC28.34■■■□□ 2.13
COL5A2P05997 RHOD-202ENST00000532559 538 ntTSL 3 BASIC28.34■■■□□ 2.13
COL5A2P05997 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC28.34■■■□□ 2.13
COL5A2P05997 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
COL5A2P05997 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
COL5A2P05997 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
COL5A2P05997 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
COL5A2P05997 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC28.33■■■□□ 2.13
COL5A2P05997 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC28.33■■■□□ 2.13
COL5A2P05997 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
COL5A2P05997 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
COL5A2P05997 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC28.32■■■□□ 2.12
COL5A2P05997 SERPINH1P1-201ENST00000419794 1249 ntBASIC28.32■■■□□ 2.12
COL5A2P05997 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC28.32■■■□□ 2.12
COL5A2P05997 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC28.32■■■□□ 2.12
COL5A2P05997 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
COL5A2P05997 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
COL5A2P05997 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC28.31■■■□□ 2.12
COL5A2P05997 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
COL5A2P05997 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
COL5A2P05997 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
COL5A2P05997 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
COL5A2P05997 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC28.3■■■□□ 2.12
COL5A2P05997 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
COL5A2P05997 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC28.3■■■□□ 2.12
COL5A2P05997 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC28.3■■■□□ 2.12
COL5A2P05997 AC008550.1-201ENST00000511500 884 ntBASIC28.3■■■□□ 2.12
COL5A2P05997 AC008403.3-201ENST00000598924 454 ntBASIC28.3■■■□□ 2.12
COL5A2P05997 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC28.3■■■□□ 2.12
COL5A2P05997 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC28.3■■■□□ 2.12
COL5A2P05997 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
COL5A2P05997 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
COL5A2P05997 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
COL5A2P05997 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC28.3■■■□□ 2.12
COL5A2P05997 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC28.29■■■□□ 2.12
COL5A2P05997 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
COL5A2P05997 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
COL5A2P05997 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
COL5A2P05997 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC28.29■■■□□ 2.12
COL5A2P05997 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
COL5A2P05997 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
COL5A2P05997 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
COL5A2P05997 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
COL5A2P05997 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC28.28■■■□□ 2.12
COL5A2P05997 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC28.28■■■□□ 2.12
COL5A2P05997 CD44-222ENST00000526025 1052 ntTSL 2 BASIC28.28■■■□□ 2.12
COL5A2P05997 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
COL5A2P05997 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC28.28■■■□□ 2.12
COL5A2P05997 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
COL5A2P05997 PEX7-202ENST00000367756 680 ntTSL 3 BASIC28.27■■■□□ 2.12
COL5A2P05997 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC28.27■■■□□ 2.12
COL5A2P05997 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
COL5A2P05997 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
COL5A2P05997 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC28.27■■■□□ 2.12
COL5A2P05997 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC28.27■■■□□ 2.12
COL5A2P05997 AL359736.2-201ENST00000621992 437 ntBASIC28.27■■■□□ 2.12
COL5A2P05997 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC28.26■■■□□ 2.11
COL5A2P05997 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
COL5A2P05997 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
COL5A2P05997 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC28.26■■■□□ 2.11
COL5A2P05997 KRT17P1-201ENST00000399211 1546 ntBASIC28.26■■■□□ 2.11
COL5A2P05997 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
COL5A2P05997 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
COL5A2P05997 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
COL5A2P05997 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC28.26■■■□□ 2.11
COL5A2P05997 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC28.25■■■□□ 2.11
COL5A2P05997 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC28.25■■■□□ 2.11
COL5A2P05997 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
COL5A2P05997 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC28.25■■■□□ 2.11
COL5A2P05997 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC28.25■■■□□ 2.11
COL5A2P05997 PBX1-209ENST00000485769 834 ntTSL 2 BASIC28.25■■■□□ 2.11
COL5A2P05997 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
COL5A2P05997 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
COL5A2P05997 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC28.24■■■□□ 2.11
COL5A2P05997 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
COL5A2P05997 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC28.24■■■□□ 2.11
COL5A2P05997 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC28.24■■■□□ 2.11
COL5A2P05997 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC28.24■■■□□ 2.11
COL5A2P05997 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC28.24■■■□□ 2.11
COL5A2P05997 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
COL5A2P05997 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
COL5A2P05997 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC28.24■■■□□ 2.11
COL5A2P05997 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC28.24■■■□□ 2.11
COL5A2P05997 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC28.23■■■□□ 2.11
COL5A2P05997 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC28.23■■■□□ 2.11
COL5A2P05997 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
COL5A2P05997 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC28.23■■■□□ 2.11
COL5A2P05997 GATS-209ENST00000454084 1030 ntTSL 3 BASIC28.23■■■□□ 2.11
COL5A2P05997 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC28.23■■■□□ 2.11
COL5A2P05997 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC28.23■■■□□ 2.11
COL5A2P05997 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC28.23■■■□□ 2.11
COL5A2P05997 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC28.23■■■□□ 2.11
COL5A2P05997 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
COL5A2P05997 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC28.23■■■□□ 2.11
COL5A2P05997 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms