Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
PDCD6O75340 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17.88■□□□□ 0.45
PDCD6O75340 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC17.88■□□□□ 0.45
PDCD6O75340 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDCD6O75340 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
PDCD6O75340 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.88■□□□□ 0.45
PDCD6O75340 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PDCD6O75340 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDCD6O75340 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDCD6O75340 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC17.88■□□□□ 0.45
PDCD6O75340 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC17.88■□□□□ 0.45
PDCD6O75340 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PDCD6O75340 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDCD6O75340 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PDCD6O75340 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC17.88■□□□□ 0.45
PDCD6O75340 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDCD6O75340 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.88■□□□□ 0.45
PDCD6O75340 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
PDCD6O75340 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDCD6O75340 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PDCD6O75340 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC17.88■□□□□ 0.45
PDCD6O75340 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
PDCD6O75340 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
PDCD6O75340 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDCD6O75340 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.87■□□□□ 0.45
PDCD6O75340 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDCD6O75340 SNX3-202ENST00000349379 890 ntTSL 2 BASIC17.87■□□□□ 0.45
PDCD6O75340 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC17.87■□□□□ 0.45
PDCD6O75340 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC17.87■□□□□ 0.45
PDCD6O75340 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC17.87■□□□□ 0.45
PDCD6O75340 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC17.87■□□□□ 0.45
PDCD6O75340 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC17.87■□□□□ 0.45
PDCD6O75340 AP006587.3-201ENST00000525742 1516 ntBASIC17.87■□□□□ 0.45
PDCD6O75340 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDCD6O75340 AL049796.1-201ENST00000565336 1766 ntBASIC17.86■□□□□ 0.45
PDCD6O75340 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDCD6O75340 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDCD6O75340 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.86■□□□□ 0.45
PDCD6O75340 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDCD6O75340 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
PDCD6O75340 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDCD6O75340 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDCD6O75340 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
PDCD6O75340 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
PDCD6O75340 AC131281.2-201ENST00000520478 145 ntBASIC17.86■□□□□ 0.45
PDCD6O75340 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC17.86■□□□□ 0.45
PDCD6O75340 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC17.86■□□□□ 0.45
PDCD6O75340 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDCD6O75340 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.86■□□□□ 0.45
PDCD6O75340 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDCD6O75340 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
PDCD6O75340 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
PDCD6O75340 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDCD6O75340 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
PDCD6O75340 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDCD6O75340 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDCD6O75340 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
PDCD6O75340 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDCD6O75340 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDCD6O75340 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDCD6O75340 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PDCD6O75340 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PDCD6O75340 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
PDCD6O75340 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC17.85■□□□□ 0.45
PDCD6O75340 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC17.85■□□□□ 0.45
PDCD6O75340 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC17.85■□□□□ 0.45
PDCD6O75340 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PDCD6O75340 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PDCD6O75340 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDCD6O75340 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
PDCD6O75340 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC17.84■□□□□ 0.45
PDCD6O75340 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDCD6O75340 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDCD6O75340 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDCD6O75340 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PDCD6O75340 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC17.84■□□□□ 0.45
PDCD6O75340 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDCD6O75340 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDCD6O75340 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.84■□□□□ 0.45
PDCD6O75340 PTMA-205ENST00000410064 814 ntTSL 2 BASIC17.84■□□□□ 0.45
PDCD6O75340 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC17.84■□□□□ 0.45
PDCD6O75340 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
PDCD6O75340 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC17.84■□□□□ 0.45
PDCD6O75340 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDCD6O75340 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PDCD6O75340 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDCD6O75340 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PDCD6O75340 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PDCD6O75340 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PDCD6O75340 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC17.83■□□□□ 0.45
PDCD6O75340 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PDCD6O75340 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC17.83■□□□□ 0.45
PDCD6O75340 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC17.83■□□□□ 0.44
PDCD6O75340 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC17.83■□□□□ 0.44
PDCD6O75340 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
PDCD6O75340 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PDCD6O75340 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PDCD6O75340 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PDCD6O75340 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC17.83■□□□□ 0.44
PDCD6O75340 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms