Protein–RNA interactions for Protein: A6NCQ9

RNF222, RING finger protein 222, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF222A6NCQ9 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RNF222A6NCQ9 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF222A6NCQ9 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF222A6NCQ9 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC17.29■□□□□ 0.36
RNF222A6NCQ9 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF222A6NCQ9 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF222A6NCQ9 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF222A6NCQ9 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF222A6NCQ9 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF222A6NCQ9 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF222A6NCQ9 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF222A6NCQ9 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF222A6NCQ9 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF222A6NCQ9 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.28■□□□□ 0.36
RNF222A6NCQ9 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF222A6NCQ9 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF222A6NCQ9 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF222A6NCQ9 AC027702.1-201ENST00000563810 1770 ntBASIC17.28■□□□□ 0.36
RNF222A6NCQ9 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF222A6NCQ9 AC112907.3-201ENST00000577781 2400 ntBASIC17.28■□□□□ 0.36
RNF222A6NCQ9 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
RNF222A6NCQ9 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RNF222A6NCQ9 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC17.28■□□□□ 0.36
RNF222A6NCQ9 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
RNF222A6NCQ9 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC17.28■□□□□ 0.36
RNF222A6NCQ9 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RNF222A6NCQ9 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
RNF222A6NCQ9 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.28■□□□□ 0.36
RNF222A6NCQ9 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF222A6NCQ9 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RNF222A6NCQ9 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC17.28■□□□□ 0.36
RNF222A6NCQ9 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
RNF222A6NCQ9 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF222A6NCQ9 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF222A6NCQ9 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF222A6NCQ9 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF222A6NCQ9 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.27■□□□□ 0.36
RNF222A6NCQ9 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
RNF222A6NCQ9 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF222A6NCQ9 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF222A6NCQ9 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC17.27■□□□□ 0.36
RNF222A6NCQ9 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.27■□□□□ 0.35
RNF222A6NCQ9 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RNF222A6NCQ9 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
RNF222A6NCQ9 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RNF222A6NCQ9 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RNF222A6NCQ9 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.27■□□□□ 0.35
RNF222A6NCQ9 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.27■□□□□ 0.35
RNF222A6NCQ9 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RNF222A6NCQ9 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF222A6NCQ9 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF222A6NCQ9 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF222A6NCQ9 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF222A6NCQ9 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RNF222A6NCQ9 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC17.26■□□□□ 0.35
RNF222A6NCQ9 DUX4L4-201ENST00000566884 1269 ntBASIC17.26■□□□□ 0.35
RNF222A6NCQ9 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC17.26■□□□□ 0.35
RNF222A6NCQ9 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF222A6NCQ9 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
RNF222A6NCQ9 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF222A6NCQ9 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF222A6NCQ9 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.26■□□□□ 0.35
RNF222A6NCQ9 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF222A6NCQ9 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF222A6NCQ9 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RNF222A6NCQ9 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
RNF222A6NCQ9 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF222A6NCQ9 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF222A6NCQ9 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.25■□□□□ 0.35
RNF222A6NCQ9 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
RNF222A6NCQ9 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF222A6NCQ9 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF222A6NCQ9 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.25■□□□□ 0.35
RNF222A6NCQ9 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
RNF222A6NCQ9 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF222A6NCQ9 ASB1-202ENST00000409297 878 ntTSL 5 BASIC17.25■□□□□ 0.35
RNF222A6NCQ9 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
RNF222A6NCQ9 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RNF222A6NCQ9 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
RNF222A6NCQ9 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RNF222A6NCQ9 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RNF222A6NCQ9 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF222A6NCQ9 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.25■□□□□ 0.35
RNF222A6NCQ9 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
RNF222A6NCQ9 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RNF222A6NCQ9 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF222A6NCQ9 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
RNF222A6NCQ9 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RNF222A6NCQ9 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF222A6NCQ9 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.24■□□□□ 0.35
RNF222A6NCQ9 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF222A6NCQ9 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RNF222A6NCQ9 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF222A6NCQ9 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF222A6NCQ9 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF222A6NCQ9 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF222A6NCQ9 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF222A6NCQ9 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.24■□□□□ 0.35
RNF222A6NCQ9 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF222A6NCQ9 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms