Protein–RNA interactions for Protein: O00571

DDX3X, ATP-dependent RNA helicase DDX3X, humanhuman

Known RBP eCLIP

Length 662 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX3XO00571 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.862e-7■□□□□ 9.6
DDX3XO00571 DNAJB2-206ENST00000439026 652 ntTSL 319.76■□□□□ 0.754e-14■□□□□ 9.6
DDX3XO00571 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.74■□□□□ 0.752e-7■□□□□ 9.6
DDX3XO00571 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.2■□□□□ 0.662e-7■□□□□ 9.6
DDX3XO00571 TRIM47-205ENST00000587774 720 ntTSL 218.94■□□□□ 0.622e-7■□□□□ 9.6
DDX3XO00571 USP22-204ENST00000476111 573 ntTSL 318.78■□□□□ 0.62e-7■□□□□ 9.6
DDX3XO00571 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.62e-7■□□□□ 9.6
DDX3XO00571 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.594e-14■□□□□ 9.6
DDX3XO00571 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.56■□□□□ 0.564e-14■□□□□ 9.6
DDX3XO00571 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.452e-7■□□□□ 9.6
DDX3XO00571 CLUH-213ENST00000576309 433 ntTSL 317.58■□□□□ 0.42e-7■□□□□ 9.6
DDX3XO00571 DNAJB2-205ENST00000425450 828 ntTSL 317.34■□□□□ 0.374e-14■□□□□ 9.6
DDX3XO00571 KIF22-205ENST00000563666 1603 ntTSL 517.31■□□□□ 0.362e-7■□□□□ 9.6
DDX3XO00571 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.352e-7■□□□□ 9.6
DDX3XO00571 TMC6-219ENST00000591594 614 ntTSL 317.23■□□□□ 0.354e-14■□□□□ 9.6
DDX3XO00571 TRIM47-203ENST00000586495 605 ntTSL 217.16■□□□□ 0.342e-7■□□□□ 9.6
DDX3XO00571 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.92■□□□□ 0.32e-7■□□□□ 9.6
DDX3XO00571 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.83■□□□□ 0.282e-7■□□□□ 9.6
DDX3XO00571 CPSF3-203ENST00000475482 871 ntTSL 416.33■□□□□ 0.22e-7■□□□□ 9.6
DDX3XO00571 DNAJB2-213ENST00000477917 4487 ntTSL 216.2■□□□□ 0.184e-14■□□□□ 9.6
DDX3XO00571 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC14.99□□□□□ -0.012e-7■□□□□ 9.6
DDX3XO00571 SMAD2-204ENST00000585978 663 ntTSL 314.52□□□□□ -0.092e-7■□□□□ 9.6
DDX3XO00571 HACD3-207ENST00000566074 1658 ntTSL 5 BASIC14.12□□□□□ -0.152e-7■□□□□ 9.6
DDX3XO00571 ZFYVE21-209ENST00000555501 4453 ntTSL 1 (best)13.81□□□□□ -0.22e-7■□□□□ 9.6
DDX3XO00571 SMAD2-210ENST00000587421 575 ntTSL 413.67□□□□□ -0.222e-7■□□□□ 9.6
DDX3XO00571 CCAR2-212ENST00000523349 542 ntTSL 413□□□□□ -0.332e-14■□□□□ 9.6
DDX3XO00571 SMAP1-203ENST00000370455 3333 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.422e-7■□□□□ 9.6
DDX3XO00571 SLC7A6-206ENST00000563146 514 ntTSL 311.73□□□□□ -0.534e-14■□□□□ 9.6
DDX3XO00571 FNBP1-204ENST00000446176 5393 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.632e-7■□□□□ 9.6
DDX3XO00571 FSD1L-207ENST00000484973 1711 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.72e-7■□□□□ 9.6
DDX3XO00571 FSD1L-203ENST00000394926 1947 ntTSL 5 BASIC10.55□□□□□ -0.722e-7■□□□□ 9.6
DDX3XO00571 COA4-204ENST00000541455 1038 ntTSL 5 BASIC10.55□□□□□ -0.722e-7■□□□□ 9.6
DDX3XO00571 SMAD2-205ENST00000586040 1971 ntTSL 5 BASIC10.08□□□□□ -0.82e-7■□□□□ 9.6
DDX3XO00571 COA4-206ENST00000545127 922 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.82e-7■□□□□ 9.6
DDX3XO00571 SLC7A6-205ENST00000563080 1030 ntTSL 59.69□□□□□ -0.864e-14■□□□□ 9.6
DDX3XO00571 CCAR2-210ENST00000521837 549 ntTSL 49.34□□□□□ -0.912e-14■□□□□ 9.6
DDX3XO00571 FSD1L-202ENST00000374710 7664 ntTSL 2 BASIC9.19□□□□□ -0.942e-7■□□□□ 9.6
DDX3XO00571 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC7.58□□□□□ -1.22e-7■□□□□ 9.6
DDX3XO00571 SLC7A6-203ENST00000562727 493 ntTSL 57.43□□□□□ -1.224e-14■□□□□ 9.6
DDX3XO00571 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC7.04□□□□□ -1.282e-7■□□□□ 9.6
DDX3XO00571 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC6.1□□□□□ -1.432e-7■□□□□ 9.6
DDX3XO00571 HACD3-204ENST00000562832 789 ntTSL 53.64□□□□□ -1.832e-7■□□□□ 9.6
DDX3XO00571 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.81□□□□□ -2.122e-7■□□□□ 9.6
DDX3XO00571 UTP3-201ENST00000254803 2073 ntAPPRIS P1 BASIC12.68□□□□□ -0.384e-15■□□□□ 9.6
DDX3XO00571 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.942e-32■□□□□ 9.6
DDX3XO00571 UBAP2L-209ENST00000437652 911 ntTSL 326.34■■□□□ 1.813e-16■□□□□ 9.5
DDX3XO00571 UBAP2L-205ENST00000412596 980 ntTSL 525.7■■□□□ 1.73e-16■□□□□ 9.5
DDX3XO00571 UBAP2L-211ENST00000456325 812 ntTSL 317.62■□□□□ 0.413e-16■□□□□ 9.5
DDX3XO00571 UBAP2L-210ENST00000441890 678 ntTSL 217.42■□□□□ 0.383e-16■□□□□ 9.5
DDX3XO00571 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.013e-16■□□□□ 9.5
DDX3XO00571 UBAP2L-204ENST00000368504 1120 ntTSL 513.71□□□□□ -0.213e-16■□□□□ 9.5
DDX3XO00571 UBAP2L-207ENST00000428931 3988 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.593e-16■□□□□ 9.5
DDX3XO00571 UBAP2L-201ENST00000271877 3997 ntTSL 5 BASIC11.28□□□□□ -0.63e-16■□□□□ 9.5
DDX3XO00571 UBAP2L-220ENST00000613315 3451 ntTSL 2 BASIC9.63□□□□□ -0.873e-16■□□□□ 9.5
DDX3XO00571 UBAP2L-202ENST00000343815 3411 ntTSL 1 (best) BASIC9.39□□□□□ -0.913e-16■□□□□ 9.5
DDX3XO00571 UBAP2L-203ENST00000361546 3864 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.053e-16■□□□□ 9.5
DDX3XO00571 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC19.3■□□□□ 0.683e-7■□□□□ 9.5
DDX3XO00571 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC26.26■■□□□ 1.796e-8■□□□□ 9.5
DDX3XO00571 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.776e-8■□□□□ 9.5
DDX3XO00571 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.746e-8■□□□□ 9.5
DDX3XO00571 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.456e-8■□□□□ 9.5
DDX3XO00571 DDX42-212ENST00000581135 589 ntTSL 416.9■□□□□ 0.36e-8■□□□□ 9.5
DDX3XO00571 ABCB6-202ENST00000295750 2238 ntTSL 518.89■□□□□ 0.612e-9■□□□□ 9.5
DDX3XO00571 ANK1-210ENST00000521407 498 ntTSL 511.96□□□□□ -0.499e-11■□□□□ 9.5
DDX3XO00571 ATP13A3-204ENST00000446356 542 ntTSL 48.62□□□□□ -1.038e-18■□□□□ 9.5
DDX3XO00571 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.098e-18■□□□□ 9.5
DDX3XO00571 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.063e-13■□□□□ 9.5
DDX3XO00571 PPM1A-202ENST00000325658 4125 ntTSL 1 (best) BASIC11.27□□□□□ -0.613e-13■□□□□ 9.5
DDX3XO00571 PPM1A-201ENST00000325642 1713 ntTSL 2 BASIC9.61□□□□□ -0.873e-13■□□□□ 9.5
DDX3XO00571 PPM1A-206ENST00000531143 1546 ntTSL 1 (best)7.79□□□□□ -1.163e-13■□□□□ 9.5
DDX3XO00571 PPM1A-208ENST00000532036 1561 ntTSL 56.23□□□□□ -1.413e-13■□□□□ 9.5
DDX3XO00571 ESYT2-204ENST00000483958 546 ntTSL 48.04□□□□□ -1.129e-8■□□□□ 9.5
DDX3XO00571 SPOPL-203ENST00000430968 558 ntTSL 524.96■■□□□ 1.593e-20■□□□□ 9.5
DDX3XO00571 VDAC3-208ENST00000522010 631 ntTSL 55.7□□□□□ -1.52e-7■□□□□ 9.5
DDX3XO00571 STXBP2-217ENST00000599737 1523 ntTSL 515.43■□□□□ 0.063e-6■□□□□ 9.5
DDX3XO00571 SNRPE-203ENST00000469451 248 ntTSL 311.84□□□□□ -0.517e-9■□□□□ 9.5
DDX3XO00571 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC27.6■■■□□ 2.018e-7■□□□□ 9.5
DDX3XO00571 DNPEP-204ENST00000373966 1875 ntTSL 522.87■■□□□ 1.258e-7■□□□□ 9.5
DDX3XO00571 DNPEP-203ENST00000373963 1657 ntTSL 520.18■□□□□ 0.828e-7■□□□□ 9.5
DDX3XO00571 DNPEP-202ENST00000322176 925 ntTSL 319.16■□□□□ 0.668e-7■□□□□ 9.5
DDX3XO00571 DNPEP-218ENST00000521459 714 ntTSL 519.08■□□□□ 0.648e-7■□□□□ 9.5
DDX3XO00571 DNPEP-221ENST00000523527 565 ntTSL 216.33■□□□□ 0.28e-7■□□□□ 9.5
DDX3XO00571 DNPEP-208ENST00000434339 638 ntTSL 314.44□□□□□ -0.18e-7■□□□□ 9.5
DDX3XO00571 DNPEP-220ENST00000523282 1662 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.188e-7■□□□□ 9.5
DDX3XO00571 DNPEP-209ENST00000457935 1091 ntTSL 513.69□□□□□ -0.228e-7■□□□□ 9.5
DDX3XO00571 DNPEP-210ENST00000460963 1610 ntTSL 213.63□□□□□ -0.238e-7■□□□□ 9.5
DDX3XO00571 DNPEP-205ENST00000373972 1578 ntTSL 2 BASIC13.52□□□□□ -0.258e-7■□□□□ 9.5
DDX3XO00571 DNPEP-217ENST00000520694 673 ntTSL 313.03□□□□□ -0.328e-7■□□□□ 9.5
DDX3XO00571 DNPEP-215ENST00000519698 482 ntTSL 311.44□□□□□ -0.588e-7■□□□□ 9.5
DDX3XO00571 DNPEP-216ENST00000519905 576 ntTSL 411.44□□□□□ -0.588e-7■□□□□ 9.5
DDX3XO00571 C2-202ENST00000383177 1847 ntTSL 516.5■□□□□ 0.233e-9■□□□□ 9.5
DDX3XO00571 ELOVL5-202ENST00000370913 580 ntTSL 1 (best) BASIC13.02□□□□□ -0.332e-17■□□□□ 9.5
DDX3XO00571 ELOVL5-204ENST00000465983 696 ntTSL 313□□□□□ -0.332e-17■□□□□ 9.5
DDX3XO00571 ELOVL5-206ENST00000486973 794 ntTSL 312.77□□□□□ -0.372e-17■□□□□ 9.5
DDX3XO00571 ELOVL5-205ENST00000485336 761 ntTSL 59.02□□□□□ -0.972e-17■□□□□ 9.5
DDX3XO00571 ELOVL5-207ENST00000542638 2875 ntTSL 1 (best) BASIC8.68□□□□□ -1.022e-17■□□□□ 9.5
DDX3XO00571 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.212e-17■□□□□ 9.5
DDX3XO00571 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC7.15□□□□□ -1.262e-17■□□□□ 9.5
DDX3XO00571 EEF1A1-207ENST00000490569 1802 ntTSL 58.41□□□□□ -1.061e-323■□□□□ 9.5
DDX3XO00571 EEF1A1-206ENST00000488500 792 ntTSL 27.69□□□□□ -1.181e-323■□□□□ 9.5
Retrieved 100 of 47,714 protein–RNA pairs in 1442.7 ms