Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00588Q9Y4M8 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00588Q9Y4M8 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00588Q9Y4M8 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
LINC00588Q9Y4M8 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00588Q9Y4M8 KRT18P20-201ENST00000548986 1279 ntBASIC14.59□□□□□ -0.07
LINC00588Q9Y4M8 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC14.59□□□□□ -0.07
LINC00588Q9Y4M8 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC14.59□□□□□ -0.07
LINC00588Q9Y4M8 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00588Q9Y4M8 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00588Q9Y4M8 MDK-213ENST00000617138 635 ntTSL 2 BASIC14.59□□□□□ -0.07
LINC00588Q9Y4M8 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
LINC00588Q9Y4M8 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC14.59□□□□□ -0.07
LINC00588Q9Y4M8 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC00588Q9Y4M8 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
LINC00588Q9Y4M8 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
LINC00588Q9Y4M8 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
LINC00588Q9Y4M8 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC00588Q9Y4M8 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC14.58□□□□□ -0.08
LINC00588Q9Y4M8 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC00588Q9Y4M8 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC00588Q9Y4M8 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.08
LINC00588Q9Y4M8 GALC-202ENST00000393568 2054 ntTSL 2 BASIC14.58□□□□□ -0.08
LINC00588Q9Y4M8 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC00588Q9Y4M8 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC00588Q9Y4M8 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC00588Q9Y4M8 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC14.58□□□□□ -0.08
LINC00588Q9Y4M8 ID1-201ENST00000376105 1233 ntBASIC14.58□□□□□ -0.08
LINC00588Q9Y4M8 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LINC00588Q9Y4M8 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC00588Q9Y4M8 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
LINC00588Q9Y4M8 TK2-208ENST00000545043 1120 ntTSL 2 BASIC14.58□□□□□ -0.08
LINC00588Q9Y4M8 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC00588Q9Y4M8 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
LINC00588Q9Y4M8 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
LINC00588Q9Y4M8 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC14.58□□□□□ -0.08
LINC00588Q9Y4M8 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LINC00588Q9Y4M8 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC14.58□□□□□ -0.08
LINC00588Q9Y4M8 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC14.58□□□□□ -0.08
LINC00588Q9Y4M8 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC00588Q9Y4M8 TFG-210ENST00000620299 1289 ntTSL 5 BASIC14.58□□□□□ -0.08
LINC00588Q9Y4M8 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC14.58□□□□□ -0.08
LINC00588Q9Y4M8 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC14.58□□□□□ -0.08
LINC00588Q9Y4M8 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LINC00588Q9Y4M8 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LINC00588Q9Y4M8 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC14.58□□□□□ -0.08
LINC00588Q9Y4M8 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC14.58□□□□□ -0.08
LINC00588Q9Y4M8 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00588Q9Y4M8 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC14.57□□□□□ -0.08
LINC00588Q9Y4M8 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00588Q9Y4M8 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00588Q9Y4M8 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00588Q9Y4M8 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00588Q9Y4M8 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00588Q9Y4M8 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00588Q9Y4M8 NAA20-201ENST00000310450 920 ntTSL 2 BASIC14.57□□□□□ -0.08
LINC00588Q9Y4M8 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00588Q9Y4M8 RNF146-206ENST00000480444 843 ntTSL 2 BASIC14.57□□□□□ -0.08
LINC00588Q9Y4M8 BRI3-207ENST00000539286 699 ntTSL 2 BASIC14.57□□□□□ -0.08
LINC00588Q9Y4M8 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC14.57□□□□□ -0.08
LINC00588Q9Y4M8 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
LINC00588Q9Y4M8 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00588Q9Y4M8 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00588Q9Y4M8 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00588Q9Y4M8 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC14.57□□□□□ -0.08
LINC00588Q9Y4M8 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00588Q9Y4M8 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00588Q9Y4M8 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00588Q9Y4M8 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
LINC00588Q9Y4M8 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00588Q9Y4M8 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00588Q9Y4M8 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00588Q9Y4M8 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LINC00588Q9Y4M8 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC14.57□□□□□ -0.08
LINC00588Q9Y4M8 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
LINC00588Q9Y4M8 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00588Q9Y4M8 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00588Q9Y4M8 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00588Q9Y4M8 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00588Q9Y4M8 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
LINC00588Q9Y4M8 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
LINC00588Q9Y4M8 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00588Q9Y4M8 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00588Q9Y4M8 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC14.56□□□□□ -0.08
LINC00588Q9Y4M8 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC14.56□□□□□ -0.08
LINC00588Q9Y4M8 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00588Q9Y4M8 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00588Q9Y4M8 AC006970.2-201ENST00000450065 779 ntBASIC14.56□□□□□ -0.08
LINC00588Q9Y4M8 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC14.56□□□□□ -0.08
LINC00588Q9Y4M8 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC14.56□□□□□ -0.08
LINC00588Q9Y4M8 GXYLT1P5-201ENST00000614548 1189 ntBASIC14.56□□□□□ -0.08
LINC00588Q9Y4M8 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00588Q9Y4M8 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00588Q9Y4M8 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
LINC00588Q9Y4M8 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00588Q9Y4M8 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00588Q9Y4M8 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC14.56□□□□□ -0.08
LINC00588Q9Y4M8 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LINC00588Q9Y4M8 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LINC00588Q9Y4M8 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms