Protein–RNA interactions for Protein: Q9HC58

SLC24A3, Sodium/potassium/calcium exchanger 3, humanhuman

Predictions only

Length 644 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC24A3Q9HC58 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.52■□□□□ 0.88
SLC24A3Q9HC58 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
SLC24A3Q9HC58 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC24A3Q9HC58 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.52■□□□□ 0.87
SLC24A3Q9HC58 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SLC24A3Q9HC58 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SLC24A3Q9HC58 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC24A3Q9HC58 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC24A3Q9HC58 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC24A3Q9HC58 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SLC24A3Q9HC58 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC24A3Q9HC58 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SLC24A3Q9HC58 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SLC24A3Q9HC58 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC24A3Q9HC58 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC24A3Q9HC58 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC24A3Q9HC58 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC24A3Q9HC58 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.51■□□□□ 0.87
SLC24A3Q9HC58 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SLC24A3Q9HC58 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.51■□□□□ 0.87
SLC24A3Q9HC58 AL512631.2-201ENST00000604634 923 ntBASIC20.51■□□□□ 0.87
SLC24A3Q9HC58 AC106739.1-201ENST00000617035 715 ntBASIC20.51■□□□□ 0.87
SLC24A3Q9HC58 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.51■□□□□ 0.87
SLC24A3Q9HC58 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.51■□□□□ 0.87
SLC24A3Q9HC58 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SLC24A3Q9HC58 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
SLC24A3Q9HC58 WAC-202ENST00000347934 2839 ntTSL 5 BASIC20.51■□□□□ 0.87
SLC24A3Q9HC58 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.51■□□□□ 0.87
SLC24A3Q9HC58 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC24A3Q9HC58 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
SLC24A3Q9HC58 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.51■□□□□ 0.87
SLC24A3Q9HC58 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.51■□□□□ 0.87
SLC24A3Q9HC58 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC24A3Q9HC58 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SLC24A3Q9HC58 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC24A3Q9HC58 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
SLC24A3Q9HC58 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
SLC24A3Q9HC58 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
SLC24A3Q9HC58 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
SLC24A3Q9HC58 MIR6722-201ENST00000617286 78 ntBASIC20.5■□□□□ 0.87
SLC24A3Q9HC58 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SLC24A3Q9HC58 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
SLC24A3Q9HC58 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC24A3Q9HC58 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SLC24A3Q9HC58 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.49■□□□□ 0.87
SLC24A3Q9HC58 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.49■□□□□ 0.87
SLC24A3Q9HC58 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLC24A3Q9HC58 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLC24A3Q9HC58 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLC24A3Q9HC58 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
SLC24A3Q9HC58 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLC24A3Q9HC58 FAM99A-202ENST00000538190 1989 ntBASIC20.49■□□□□ 0.87
SLC24A3Q9HC58 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.49■□□□□ 0.87
SLC24A3Q9HC58 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.49■□□□□ 0.87
SLC24A3Q9HC58 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SLC24A3Q9HC58 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.49■□□□□ 0.87
SLC24A3Q9HC58 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLC24A3Q9HC58 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC24A3Q9HC58 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC24A3Q9HC58 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC24A3Q9HC58 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SLC24A3Q9HC58 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.48■□□□□ 0.87
SLC24A3Q9HC58 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SLC24A3Q9HC58 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC24A3Q9HC58 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC24A3Q9HC58 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
SLC24A3Q9HC58 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SLC24A3Q9HC58 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.48■□□□□ 0.87
SLC24A3Q9HC58 AC142381.2-201ENST00000566120 298 ntBASIC20.48■□□□□ 0.87
SLC24A3Q9HC58 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.48■□□□□ 0.87
SLC24A3Q9HC58 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SLC24A3Q9HC58 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.48■□□□□ 0.87
SLC24A3Q9HC58 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC24A3Q9HC58 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC24A3Q9HC58 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC24A3Q9HC58 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC24A3Q9HC58 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC24A3Q9HC58 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.47■□□□□ 0.87
SLC24A3Q9HC58 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC24A3Q9HC58 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.47■□□□□ 0.87
SLC24A3Q9HC58 LINC01006-201ENST00000333319 2292 ntBASIC20.47■□□□□ 0.87
SLC24A3Q9HC58 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC24A3Q9HC58 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC24A3Q9HC58 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.47■□□□□ 0.87
SLC24A3Q9HC58 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SLC24A3Q9HC58 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC24A3Q9HC58 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
SLC24A3Q9HC58 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.47■□□□□ 0.87
SLC24A3Q9HC58 PBX2P1-201ENST00000493219 1291 ntBASIC20.47■□□□□ 0.87
SLC24A3Q9HC58 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.47■□□□□ 0.87
SLC24A3Q9HC58 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
SLC24A3Q9HC58 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.47■□□□□ 0.87
SLC24A3Q9HC58 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.47■□□□□ 0.87
SLC24A3Q9HC58 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.47■□□□□ 0.87
SLC24A3Q9HC58 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SLC24A3Q9HC58 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC24A3Q9HC58 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
SLC24A3Q9HC58 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC24A3Q9HC58 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC24A3Q9HC58 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms