Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 AC003102.1-202ENST00000563394 1796 ntBASIC23.35■■□□□ 1.33
VPS16Q9H269 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
VPS16Q9H269 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
VPS16Q9H269 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
VPS16Q9H269 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
VPS16Q9H269 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
VPS16Q9H269 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
VPS16Q9H269 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
VPS16Q9H269 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
VPS16Q9H269 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
VPS16Q9H269 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
VPS16Q9H269 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
VPS16Q9H269 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
VPS16Q9H269 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
VPS16Q9H269 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC23.33■■□□□ 1.33
VPS16Q9H269 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
VPS16Q9H269 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC23.33■■□□□ 1.33
VPS16Q9H269 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC23.33■■□□□ 1.33
VPS16Q9H269 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
VPS16Q9H269 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
VPS16Q9H269 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
VPS16Q9H269 AC131281.2-201ENST00000520478 145 ntBASIC23.33■■□□□ 1.33
VPS16Q9H269 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC23.33■■□□□ 1.33
VPS16Q9H269 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
VPS16Q9H269 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC23.33■■□□□ 1.32
VPS16Q9H269 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
VPS16Q9H269 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
VPS16Q9H269 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
VPS16Q9H269 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
VPS16Q9H269 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC23.32■■□□□ 1.32
VPS16Q9H269 AP005435.1-201ENST00000529293 1178 ntBASIC23.32■■□□□ 1.32
VPS16Q9H269 AC011298.3-201ENST00000615796 283 ntBASIC23.32■■□□□ 1.32
VPS16Q9H269 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
VPS16Q9H269 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
VPS16Q9H269 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
VPS16Q9H269 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
VPS16Q9H269 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC23.32■■□□□ 1.32
VPS16Q9H269 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
VPS16Q9H269 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
VPS16Q9H269 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
VPS16Q9H269 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
VPS16Q9H269 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC23.31■■□□□ 1.32
VPS16Q9H269 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
VPS16Q9H269 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
VPS16Q9H269 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC23.31■■□□□ 1.32
VPS16Q9H269 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
VPS16Q9H269 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
VPS16Q9H269 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC23.31■■□□□ 1.32
VPS16Q9H269 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC23.31■■□□□ 1.32
VPS16Q9H269 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC23.31■■□□□ 1.32
VPS16Q9H269 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC23.31■■□□□ 1.32
VPS16Q9H269 AL034346.1-201ENST00000568244 1277 ntBASIC23.31■■□□□ 1.32
VPS16Q9H269 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
VPS16Q9H269 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC23.31■■□□□ 1.32
VPS16Q9H269 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC23.31■■□□□ 1.32
VPS16Q9H269 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
VPS16Q9H269 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
VPS16Q9H269 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC23.3■■□□□ 1.32
VPS16Q9H269 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC23.3■■□□□ 1.32
VPS16Q9H269 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
VPS16Q9H269 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
VPS16Q9H269 AL157384.1-201ENST00000445995 2473 ntBASIC23.3■■□□□ 1.32
VPS16Q9H269 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
VPS16Q9H269 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC23.3■■□□□ 1.32
VPS16Q9H269 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
VPS16Q9H269 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
VPS16Q9H269 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC23.29■■□□□ 1.32
VPS16Q9H269 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
VPS16Q9H269 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
VPS16Q9H269 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
VPS16Q9H269 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC23.29■■□□□ 1.32
VPS16Q9H269 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
VPS16Q9H269 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
VPS16Q9H269 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC23.29■■□□□ 1.32
VPS16Q9H269 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
VPS16Q9H269 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
VPS16Q9H269 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
VPS16Q9H269 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
VPS16Q9H269 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
VPS16Q9H269 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
VPS16Q9H269 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
VPS16Q9H269 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC23.28■■□□□ 1.32
VPS16Q9H269 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
VPS16Q9H269 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
VPS16Q9H269 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC23.28■■□□□ 1.32
VPS16Q9H269 SF1-220ENST00000626028 704 ntTSL 2 BASIC23.28■■□□□ 1.32
VPS16Q9H269 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
VPS16Q9H269 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
VPS16Q9H269 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC23.28■■□□□ 1.32
VPS16Q9H269 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
VPS16Q9H269 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
VPS16Q9H269 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
VPS16Q9H269 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
VPS16Q9H269 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
VPS16Q9H269 SNX3-202ENST00000349379 890 ntTSL 2 BASIC23.27■■□□□ 1.32
VPS16Q9H269 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC23.27■■□□□ 1.32
VPS16Q9H269 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
VPS16Q9H269 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
VPS16Q9H269 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
VPS16Q9H269 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms