Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
TUBA1CQ9BQE3 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.99■□□□□ 0.79
TUBA1CQ9BQE3 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TUBA1CQ9BQE3 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TUBA1CQ9BQE3 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TUBA1CQ9BQE3 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
TUBA1CQ9BQE3 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TUBA1CQ9BQE3 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
TUBA1CQ9BQE3 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TUBA1CQ9BQE3 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
TUBA1CQ9BQE3 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.98■□□□□ 0.79
TUBA1CQ9BQE3 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
TUBA1CQ9BQE3 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
TUBA1CQ9BQE3 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.98■□□□□ 0.79
TUBA1CQ9BQE3 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.98■□□□□ 0.79
TUBA1CQ9BQE3 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.98■□□□□ 0.79
TUBA1CQ9BQE3 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.98■□□□□ 0.79
TUBA1CQ9BQE3 AL499627.2-201ENST00000606283 725 ntBASIC19.98■□□□□ 0.79
TUBA1CQ9BQE3 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TUBA1CQ9BQE3 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TUBA1CQ9BQE3 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
TUBA1CQ9BQE3 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.98■□□□□ 0.79
TUBA1CQ9BQE3 LINC01529-204ENST00000636474 1715 ntBASIC19.98■□□□□ 0.79
TUBA1CQ9BQE3 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
TUBA1CQ9BQE3 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
TUBA1CQ9BQE3 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.98■□□□□ 0.79
TUBA1CQ9BQE3 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.98■□□□□ 0.79
TUBA1CQ9BQE3 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TUBA1CQ9BQE3 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.98■□□□□ 0.79
TUBA1CQ9BQE3 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TUBA1CQ9BQE3 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
TUBA1CQ9BQE3 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.97■□□□□ 0.79
TUBA1CQ9BQE3 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TUBA1CQ9BQE3 AC133637.1-201ENST00000624115 1537 ntBASIC19.97■□□□□ 0.79
TUBA1CQ9BQE3 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
TUBA1CQ9BQE3 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.97■□□□□ 0.79
TUBA1CQ9BQE3 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TUBA1CQ9BQE3 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.97■□□□□ 0.79
TUBA1CQ9BQE3 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.97■□□□□ 0.79
TUBA1CQ9BQE3 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.97■□□□□ 0.79
TUBA1CQ9BQE3 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.97■□□□□ 0.79
TUBA1CQ9BQE3 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TUBA1CQ9BQE3 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TUBA1CQ9BQE3 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.97■□□□□ 0.79
TUBA1CQ9BQE3 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
TUBA1CQ9BQE3 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
TUBA1CQ9BQE3 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TUBA1CQ9BQE3 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.97■□□□□ 0.79
TUBA1CQ9BQE3 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.96■□□□□ 0.79
TUBA1CQ9BQE3 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
TUBA1CQ9BQE3 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TUBA1CQ9BQE3 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.96■□□□□ 0.79
TUBA1CQ9BQE3 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.96■□□□□ 0.79
TUBA1CQ9BQE3 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TUBA1CQ9BQE3 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TUBA1CQ9BQE3 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.96■□□□□ 0.79
TUBA1CQ9BQE3 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TUBA1CQ9BQE3 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.96■□□□□ 0.79
TUBA1CQ9BQE3 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
TUBA1CQ9BQE3 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.96■□□□□ 0.79
TUBA1CQ9BQE3 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TUBA1CQ9BQE3 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
TUBA1CQ9BQE3 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TUBA1CQ9BQE3 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TUBA1CQ9BQE3 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.95■□□□□ 0.78
TUBA1CQ9BQE3 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.95■□□□□ 0.78
TUBA1CQ9BQE3 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.95■□□□□ 0.78
TUBA1CQ9BQE3 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
TUBA1CQ9BQE3 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TUBA1CQ9BQE3 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TUBA1CQ9BQE3 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TUBA1CQ9BQE3 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TUBA1CQ9BQE3 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TUBA1CQ9BQE3 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TUBA1CQ9BQE3 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TUBA1CQ9BQE3 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.94■□□□□ 0.78
TUBA1CQ9BQE3 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TUBA1CQ9BQE3 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.94■□□□□ 0.78
TUBA1CQ9BQE3 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.94■□□□□ 0.78
TUBA1CQ9BQE3 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.94■□□□□ 0.78
TUBA1CQ9BQE3 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.94■□□□□ 0.78
TUBA1CQ9BQE3 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.94■□□□□ 0.78
TUBA1CQ9BQE3 SLC47A1P1-202ENST00000449666 945 ntBASIC19.94■□□□□ 0.78
TUBA1CQ9BQE3 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.94■□□□□ 0.78
TUBA1CQ9BQE3 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TUBA1CQ9BQE3 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TUBA1CQ9BQE3 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
TUBA1CQ9BQE3 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TUBA1CQ9BQE3 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TUBA1CQ9BQE3 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
TUBA1CQ9BQE3 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.93■□□□□ 0.78
TUBA1CQ9BQE3 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.93■□□□□ 0.78
TUBA1CQ9BQE3 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TUBA1CQ9BQE3 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TUBA1CQ9BQE3 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TUBA1CQ9BQE3 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TUBA1CQ9BQE3 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TUBA1CQ9BQE3 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.93■□□□□ 0.78
TUBA1CQ9BQE3 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
TUBA1CQ9BQE3 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms