Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
FOXC2Q99958 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
FOXC2Q99958 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
FOXC2Q99958 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
FOXC2Q99958 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.97■□□□□ 0.47
FOXC2Q99958 AC053503.5-201ENST00000601508 636 ntBASIC17.97■□□□□ 0.47
FOXC2Q99958 AC120498.10-201ENST00000621827 505 ntBASIC17.97■□□□□ 0.47
FOXC2Q99958 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
FOXC2Q99958 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
FOXC2Q99958 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
FOXC2Q99958 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
FOXC2Q99958 AC010980.2-201ENST00000587099 1412 ntBASIC17.97■□□□□ 0.47
FOXC2Q99958 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
FOXC2Q99958 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC17.96■□□□□ 0.47
FOXC2Q99958 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.96■□□□□ 0.47
FOXC2Q99958 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
FOXC2Q99958 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
FOXC2Q99958 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
FOXC2Q99958 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
FOXC2Q99958 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.96■□□□□ 0.47
FOXC2Q99958 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.96■□□□□ 0.47
FOXC2Q99958 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.96■□□□□ 0.47
FOXC2Q99958 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC17.96■□□□□ 0.47
FOXC2Q99958 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.96■□□□□ 0.47
FOXC2Q99958 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.96■□□□□ 0.47
FOXC2Q99958 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.96■□□□□ 0.47
FOXC2Q99958 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
FOXC2Q99958 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
FOXC2Q99958 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
FOXC2Q99958 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
FOXC2Q99958 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
FOXC2Q99958 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
FOXC2Q99958 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.95■□□□□ 0.46
FOXC2Q99958 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
FOXC2Q99958 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.95■□□□□ 0.46
FOXC2Q99958 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
FOXC2Q99958 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
FOXC2Q99958 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
FOXC2Q99958 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.95■□□□□ 0.46
FOXC2Q99958 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
FOXC2Q99958 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
FOXC2Q99958 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
FOXC2Q99958 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
FOXC2Q99958 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
FOXC2Q99958 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
FOXC2Q99958 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
FOXC2Q99958 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
FOXC2Q99958 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC17.94■□□□□ 0.46
FOXC2Q99958 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
FOXC2Q99958 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
FOXC2Q99958 AC211429.1-201ENST00000415277 523 ntBASIC17.94■□□□□ 0.46
FOXC2Q99958 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.94■□□□□ 0.46
FOXC2Q99958 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.94■□□□□ 0.46
FOXC2Q99958 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.94■□□□□ 0.46
FOXC2Q99958 LINC01023-201ENST00000606054 436 ntBASIC17.94■□□□□ 0.46
FOXC2Q99958 REXO1L12P-201ENST00000622156 912 ntBASIC17.94■□□□□ 0.46
FOXC2Q99958 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.94■□□□□ 0.46
FOXC2Q99958 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
FOXC2Q99958 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.94■□□□□ 0.46
FOXC2Q99958 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
FOXC2Q99958 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
FOXC2Q99958 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
FOXC2Q99958 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
FOXC2Q99958 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
FOXC2Q99958 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXC2Q99958 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXC2Q99958 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
FOXC2Q99958 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXC2Q99958 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC17.93■□□□□ 0.46
FOXC2Q99958 AC022211.4-201ENST00000625094 2161 ntBASIC17.93■□□□□ 0.46
FOXC2Q99958 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXC2Q99958 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXC2Q99958 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
FOXC2Q99958 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.93■□□□□ 0.46
FOXC2Q99958 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.93■□□□□ 0.46
FOXC2Q99958 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.93■□□□□ 0.46
FOXC2Q99958 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXC2Q99958 FAM197Y4-202ENST00000622692 608 ntBASIC17.93■□□□□ 0.46
FOXC2Q99958 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
FOXC2Q99958 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXC2Q99958 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXC2Q99958 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.93■□□□□ 0.46
FOXC2Q99958 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
FOXC2Q99958 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
FOXC2Q99958 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
FOXC2Q99958 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
FOXC2Q99958 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
FOXC2Q99958 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
FOXC2Q99958 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
FOXC2Q99958 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
FOXC2Q99958 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
FOXC2Q99958 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
FOXC2Q99958 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
FOXC2Q99958 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.92■□□□□ 0.46
FOXC2Q99958 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
FOXC2Q99958 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.92■□□□□ 0.46
FOXC2Q99958 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
FOXC2Q99958 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC17.92■□□□□ 0.46
FOXC2Q99958 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.92■□□□□ 0.46
FOXC2Q99958 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms