Protein–RNA interactions for Protein: Q96AK3

APOBEC3D, DNA dC->dU-editing enzyme APOBEC-3D, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3DQ96AK3 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
APOBEC3DQ96AK3 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
APOBEC3DQ96AK3 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.42■□□□□ 0.54
APOBEC3DQ96AK3 AC003102.1-202ENST00000563394 1796 ntBASIC18.42■□□□□ 0.54
APOBEC3DQ96AK3 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
APOBEC3DQ96AK3 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
APOBEC3DQ96AK3 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.42■□□□□ 0.54
APOBEC3DQ96AK3 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.42■□□□□ 0.54
APOBEC3DQ96AK3 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
APOBEC3DQ96AK3 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
APOBEC3DQ96AK3 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.42■□□□□ 0.54
APOBEC3DQ96AK3 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.42■□□□□ 0.54
APOBEC3DQ96AK3 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
APOBEC3DQ96AK3 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.42■□□□□ 0.54
APOBEC3DQ96AK3 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
APOBEC3DQ96AK3 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
APOBEC3DQ96AK3 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.42■□□□□ 0.54
APOBEC3DQ96AK3 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
APOBEC3DQ96AK3 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
APOBEC3DQ96AK3 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.42■□□□□ 0.54
APOBEC3DQ96AK3 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
APOBEC3DQ96AK3 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
APOBEC3DQ96AK3 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
APOBEC3DQ96AK3 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
APOBEC3DQ96AK3 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.41■□□□□ 0.54
APOBEC3DQ96AK3 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
APOBEC3DQ96AK3 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
APOBEC3DQ96AK3 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.41■□□□□ 0.54
APOBEC3DQ96AK3 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.41■□□□□ 0.54
APOBEC3DQ96AK3 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
APOBEC3DQ96AK3 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
APOBEC3DQ96AK3 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.41■□□□□ 0.54
APOBEC3DQ96AK3 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
APOBEC3DQ96AK3 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
APOBEC3DQ96AK3 AC055733.4-201ENST00000638462 1354 ntBASIC18.41■□□□□ 0.54
APOBEC3DQ96AK3 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.4■□□□□ 0.54
APOBEC3DQ96AK3 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.4■□□□□ 0.54
APOBEC3DQ96AK3 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
APOBEC3DQ96AK3 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
APOBEC3DQ96AK3 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
APOBEC3DQ96AK3 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
APOBEC3DQ96AK3 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.4■□□□□ 0.54
APOBEC3DQ96AK3 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
APOBEC3DQ96AK3 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
APOBEC3DQ96AK3 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.4■□□□□ 0.54
APOBEC3DQ96AK3 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.4■□□□□ 0.54
APOBEC3DQ96AK3 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
APOBEC3DQ96AK3 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
APOBEC3DQ96AK3 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
APOBEC3DQ96AK3 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.4■□□□□ 0.54
APOBEC3DQ96AK3 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
APOBEC3DQ96AK3 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
APOBEC3DQ96AK3 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
APOBEC3DQ96AK3 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.4■□□□□ 0.54
APOBEC3DQ96AK3 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
APOBEC3DQ96AK3 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.4■□□□□ 0.54
APOBEC3DQ96AK3 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
APOBEC3DQ96AK3 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
APOBEC3DQ96AK3 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
APOBEC3DQ96AK3 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
APOBEC3DQ96AK3 CLDN5-201ENST00000403084 2357 ntBASIC18.39■□□□□ 0.53
APOBEC3DQ96AK3 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
APOBEC3DQ96AK3 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
APOBEC3DQ96AK3 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.39■□□□□ 0.53
APOBEC3DQ96AK3 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
APOBEC3DQ96AK3 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
APOBEC3DQ96AK3 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.39■□□□□ 0.53
APOBEC3DQ96AK3 AC027612.3-201ENST00000413684 1047 ntBASIC18.39■□□□□ 0.53
APOBEC3DQ96AK3 MIR6084-201ENST00000622012 110 ntBASIC18.39■□□□□ 0.53
APOBEC3DQ96AK3 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.39■□□□□ 0.53
APOBEC3DQ96AK3 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
APOBEC3DQ96AK3 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.39■□□□□ 0.53
APOBEC3DQ96AK3 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.38■□□□□ 0.53
APOBEC3DQ96AK3 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
APOBEC3DQ96AK3 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
APOBEC3DQ96AK3 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
APOBEC3DQ96AK3 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
APOBEC3DQ96AK3 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
APOBEC3DQ96AK3 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
APOBEC3DQ96AK3 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
APOBEC3DQ96AK3 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.38■□□□□ 0.53
APOBEC3DQ96AK3 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.38■□□□□ 0.53
APOBEC3DQ96AK3 TPRG1LP1-201ENST00000598702 760 ntBASIC18.38■□□□□ 0.53
APOBEC3DQ96AK3 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
APOBEC3DQ96AK3 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.38■□□□□ 0.53
APOBEC3DQ96AK3 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.38■□□□□ 0.53
APOBEC3DQ96AK3 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
APOBEC3DQ96AK3 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.37■□□□□ 0.53
APOBEC3DQ96AK3 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.37■□□□□ 0.53
APOBEC3DQ96AK3 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
APOBEC3DQ96AK3 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.37■□□□□ 0.53
APOBEC3DQ96AK3 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
APOBEC3DQ96AK3 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
APOBEC3DQ96AK3 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
APOBEC3DQ96AK3 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.37■□□□□ 0.53
APOBEC3DQ96AK3 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.37■□□□□ 0.53
APOBEC3DQ96AK3 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
APOBEC3DQ96AK3 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
APOBEC3DQ96AK3 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
APOBEC3DQ96AK3 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms