Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
MBD3L1Q8WWY6 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MBD3L1Q8WWY6 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MBD3L1Q8WWY6 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
MBD3L1Q8WWY6 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC16.69■□□□□ 0.26
MBD3L1Q8WWY6 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MBD3L1Q8WWY6 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MBD3L1Q8WWY6 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MBD3L1Q8WWY6 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MBD3L1Q8WWY6 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
MBD3L1Q8WWY6 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
MBD3L1Q8WWY6 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MBD3L1Q8WWY6 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
MBD3L1Q8WWY6 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
MBD3L1Q8WWY6 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MBD3L1Q8WWY6 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
MBD3L1Q8WWY6 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
MBD3L1Q8WWY6 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
MBD3L1Q8WWY6 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
MBD3L1Q8WWY6 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC16.68■□□□□ 0.26
MBD3L1Q8WWY6 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC16.68■□□□□ 0.26
MBD3L1Q8WWY6 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
MBD3L1Q8WWY6 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MBD3L1Q8WWY6 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC16.68■□□□□ 0.26
MBD3L1Q8WWY6 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MBD3L1Q8WWY6 GPX1-201ENST00000419349 1106 ntBASIC16.68■□□□□ 0.26
MBD3L1Q8WWY6 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MBD3L1Q8WWY6 MIR4281-201ENST00000580852 62 ntBASIC16.68■□□□□ 0.26
MBD3L1Q8WWY6 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MBD3L1Q8WWY6 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
MBD3L1Q8WWY6 AC006128.1-201ENST00000624704 1661 ntBASIC16.68■□□□□ 0.26
MBD3L1Q8WWY6 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MBD3L1Q8WWY6 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MBD3L1Q8WWY6 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC16.68■□□□□ 0.26
MBD3L1Q8WWY6 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC16.68■□□□□ 0.26
MBD3L1Q8WWY6 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
MBD3L1Q8WWY6 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
MBD3L1Q8WWY6 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MBD3L1Q8WWY6 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
MBD3L1Q8WWY6 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
MBD3L1Q8WWY6 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC16.67■□□□□ 0.26
MBD3L1Q8WWY6 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
MBD3L1Q8WWY6 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC16.67■□□□□ 0.26
MBD3L1Q8WWY6 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC16.67■□□□□ 0.26
MBD3L1Q8WWY6 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
MBD3L1Q8WWY6 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MBD3L1Q8WWY6 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MBD3L1Q8WWY6 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC16.67■□□□□ 0.26
MBD3L1Q8WWY6 MIR639-201ENST00000384974 98 ntBASIC16.67■□□□□ 0.26
MBD3L1Q8WWY6 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC16.67■□□□□ 0.26
MBD3L1Q8WWY6 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MBD3L1Q8WWY6 THA1P-201ENST00000590384 1145 ntBASIC16.67■□□□□ 0.26
MBD3L1Q8WWY6 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
MBD3L1Q8WWY6 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MBD3L1Q8WWY6 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
MBD3L1Q8WWY6 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC16.67■□□□□ 0.26
MBD3L1Q8WWY6 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
MBD3L1Q8WWY6 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MBD3L1Q8WWY6 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MBD3L1Q8WWY6 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
MBD3L1Q8WWY6 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC16.67■□□□□ 0.26
MBD3L1Q8WWY6 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC16.67■□□□□ 0.26
MBD3L1Q8WWY6 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MBD3L1Q8WWY6 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MBD3L1Q8WWY6 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
MBD3L1Q8WWY6 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
MBD3L1Q8WWY6 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MBD3L1Q8WWY6 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC16.66■□□□□ 0.26
MBD3L1Q8WWY6 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC16.66■□□□□ 0.26
MBD3L1Q8WWY6 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC16.66■□□□□ 0.26
MBD3L1Q8WWY6 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
MBD3L1Q8WWY6 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
MBD3L1Q8WWY6 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MBD3L1Q8WWY6 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MBD3L1Q8WWY6 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MBD3L1Q8WWY6 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MBD3L1Q8WWY6 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
MBD3L1Q8WWY6 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MBD3L1Q8WWY6 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MBD3L1Q8WWY6 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC16.65■□□□□ 0.26
MBD3L1Q8WWY6 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MBD3L1Q8WWY6 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MBD3L1Q8WWY6 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MBD3L1Q8WWY6 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MBD3L1Q8WWY6 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MBD3L1Q8WWY6 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC16.65■□□□□ 0.26
MBD3L1Q8WWY6 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MBD3L1Q8WWY6 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC16.65■□□□□ 0.26
MBD3L1Q8WWY6 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MBD3L1Q8WWY6 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MBD3L1Q8WWY6 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MBD3L1Q8WWY6 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MBD3L1Q8WWY6 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MBD3L1Q8WWY6 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MBD3L1Q8WWY6 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
MBD3L1Q8WWY6 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
MBD3L1Q8WWY6 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
MBD3L1Q8WWY6 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC16.64■□□□□ 0.26
MBD3L1Q8WWY6 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
MBD3L1Q8WWY6 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms