Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01554Q52M75 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01554Q52M75 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01554Q52M75 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
LINC01554Q52M75 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC10.66□□□□□ -0.7
LINC01554Q52M75 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01554Q52M75 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC10.65□□□□□ -0.7
LINC01554Q52M75 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
LINC01554Q52M75 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC10.65□□□□□ -0.7
LINC01554Q52M75 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC10.65□□□□□ -0.7
LINC01554Q52M75 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC01554Q52M75 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC10.65□□□□□ -0.7
LINC01554Q52M75 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
LINC01554Q52M75 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC01554Q52M75 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
LINC01554Q52M75 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC01554Q52M75 FLJ16779-201ENST00000612722 7638 ntBASIC10.65□□□□□ -0.7
LINC01554Q52M75 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC01554Q52M75 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC01554Q52M75 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
LINC01554Q52M75 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
LINC01554Q52M75 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC01554Q52M75 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
LINC01554Q52M75 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC01554Q52M75 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC01554Q52M75 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
LINC01554Q52M75 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC01554Q52M75 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC10.65□□□□□ -0.7
LINC01554Q52M75 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
LINC01554Q52M75 AC004812.2-201ENST00000611079 2094 ntBASIC10.65□□□□□ -0.7
LINC01554Q52M75 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
LINC01554Q52M75 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.71
LINC01554Q52M75 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC10.65□□□□□ -0.71
LINC01554Q52M75 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
LINC01554Q52M75 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC10.65□□□□□ -0.71
LINC01554Q52M75 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC10.65□□□□□ -0.71
LINC01554Q52M75 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
LINC01554Q52M75 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
LINC01554Q52M75 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC01554Q52M75 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
LINC01554Q52M75 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC01554Q52M75 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
LINC01554Q52M75 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC01554Q52M75 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC01554Q52M75 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
LINC01554Q52M75 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC01554Q52M75 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC01554Q52M75 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC01554Q52M75 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC01554Q52M75 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
LINC01554Q52M75 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
LINC01554Q52M75 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
LINC01554Q52M75 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
LINC01554Q52M75 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC01554Q52M75 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC01554Q52M75 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC01554Q52M75 MLEC-202ENST00000412616 841 ntTSL 3 BASIC10.64□□□□□ -0.71
LINC01554Q52M75 ZNRF2P2-203ENST00000454624 420 ntBASIC10.64□□□□□ -0.71
LINC01554Q52M75 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC10.64□□□□□ -0.71
LINC01554Q52M75 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC10.64□□□□□ -0.71
LINC01554Q52M75 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC10.64□□□□□ -0.71
LINC01554Q52M75 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC01554Q52M75 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
LINC01554Q52M75 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC01554Q52M75 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC01554Q52M75 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC10.64□□□□□ -0.71
LINC01554Q52M75 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC01554Q52M75 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
LINC01554Q52M75 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC01554Q52M75 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
LINC01554Q52M75 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
LINC01554Q52M75 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
LINC01554Q52M75 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
LINC01554Q52M75 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC10.64□□□□□ -0.71
LINC01554Q52M75 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
LINC01554Q52M75 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC01554Q52M75 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC10.64□□□□□ -0.71
LINC01554Q52M75 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC10.63□□□□□ -0.71
LINC01554Q52M75 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC10.63□□□□□ -0.71
LINC01554Q52M75 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01554Q52M75 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01554Q52M75 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01554Q52M75 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01554Q52M75 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC10.63□□□□□ -0.71
LINC01554Q52M75 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
LINC01554Q52M75 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01554Q52M75 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01554Q52M75 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC10.63□□□□□ -0.71
LINC01554Q52M75 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01554Q52M75 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC10.63□□□□□ -0.71
LINC01554Q52M75 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01554Q52M75 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
LINC01554Q52M75 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01554Q52M75 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01554Q52M75 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
LINC01554Q52M75 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC10.63□□□□□ -0.71
LINC01554Q52M75 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC10.63□□□□□ -0.71
LINC01554Q52M75 EED-207ENST00000528180 1745 ntTSL 5 BASIC10.63□□□□□ -0.71
LINC01554Q52M75 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC10.63□□□□□ -0.71
LINC01554Q52M75 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms