Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
GABREP78334 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.27■□□□□ 0.84
GABREP78334 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
GABREP78334 ESRRAP1-201ENST00000400596 1257 ntBASIC20.27■□□□□ 0.84
GABREP78334 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.27■□□□□ 0.84
GABREP78334 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.27■□□□□ 0.84
GABREP78334 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.27■□□□□ 0.84
GABREP78334 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.27■□□□□ 0.84
GABREP78334 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.27■□□□□ 0.84
GABREP78334 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.27■□□□□ 0.84
GABREP78334 AC053503.5-201ENST00000601508 636 ntBASIC20.27■□□□□ 0.84
GABREP78334 AC083880.1-201ENST00000608266 535 ntBASIC20.27■□□□□ 0.84
GABREP78334 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
GABREP78334 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
GABREP78334 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
GABREP78334 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
GABREP78334 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
GABREP78334 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.26■□□□□ 0.83
GABREP78334 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
GABREP78334 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
GABREP78334 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GABREP78334 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GABREP78334 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.26■□□□□ 0.83
GABREP78334 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
GABREP78334 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.26■□□□□ 0.83
GABREP78334 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.26■□□□□ 0.83
GABREP78334 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
GABREP78334 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.26■□□□□ 0.83
GABREP78334 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.26■□□□□ 0.83
GABREP78334 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
GABREP78334 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.26■□□□□ 0.83
GABREP78334 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
GABREP78334 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
GABREP78334 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.26■□□□□ 0.83
GABREP78334 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GABREP78334 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GABREP78334 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GABREP78334 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
GABREP78334 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
GABREP78334 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.25■□□□□ 0.83
GABREP78334 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
GABREP78334 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
GABREP78334 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
GABREP78334 AC097658.1-201ENST00000475555 843 ntBASIC20.25■□□□□ 0.83
GABREP78334 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.25■□□□□ 0.83
GABREP78334 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.25■□□□□ 0.83
GABREP78334 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.25■□□□□ 0.83
GABREP78334 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
GABREP78334 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.25■□□□□ 0.83
GABREP78334 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
GABREP78334 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
GABREP78334 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
GABREP78334 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
GABREP78334 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
GABREP78334 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GABREP78334 GCSHP5-201ENST00000443090 522 ntBASIC20.24■□□□□ 0.83
GABREP78334 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.24■□□□□ 0.83
GABREP78334 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.24■□□□□ 0.83
GABREP78334 AC120498.10-201ENST00000621827 505 ntBASIC20.24■□□□□ 0.83
GABREP78334 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
GABREP78334 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.24■□□□□ 0.83
GABREP78334 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GABREP78334 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
GABREP78334 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
GABREP78334 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.23■□□□□ 0.83
GABREP78334 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.23■□□□□ 0.83
GABREP78334 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GABREP78334 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.23■□□□□ 0.83
GABREP78334 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GABREP78334 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.23■□□□□ 0.83
GABREP78334 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.23■□□□□ 0.83
GABREP78334 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.23■□□□□ 0.83
GABREP78334 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
GABREP78334 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.23■□□□□ 0.83
GABREP78334 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.23■□□□□ 0.83
GABREP78334 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.23■□□□□ 0.83
GABREP78334 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.23■□□□□ 0.83
GABREP78334 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GABREP78334 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
GABREP78334 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GABREP78334 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GABREP78334 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.22■□□□□ 0.83
GABREP78334 AL158047.1-201ENST00000445918 881 ntBASIC20.22■□□□□ 0.83
GABREP78334 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.22■□□□□ 0.83
GABREP78334 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.22■□□□□ 0.83
GABREP78334 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.22■□□□□ 0.83
GABREP78334 MYC-209ENST00000641252 345 ntBASIC20.22■□□□□ 0.83
GABREP78334 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
GABREP78334 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.22■□□□□ 0.83
GABREP78334 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
GABREP78334 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
GABREP78334 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.22■□□□□ 0.83
GABREP78334 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GABREP78334 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
GABREP78334 AP006587.3-201ENST00000525742 1516 ntBASIC20.22■□□□□ 0.83
GABREP78334 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
GABREP78334 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GABREP78334 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
GABREP78334 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
GABREP78334 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms