Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.97■□□□□ 0.95
SRP54P61011 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SRP54P61011 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SRP54P61011 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SRP54P61011 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.97■□□□□ 0.95
SRP54P61011 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.97■□□□□ 0.95
SRP54P61011 EEF1DP3-203ENST00000566025 782 ntBASIC20.97■□□□□ 0.95
SRP54P61011 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.97■□□□□ 0.95
SRP54P61011 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SRP54P61011 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.97■□□□□ 0.95
SRP54P61011 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.97■□□□□ 0.95
SRP54P61011 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SRP54P61011 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.97■□□□□ 0.95
SRP54P61011 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SRP54P61011 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SRP54P61011 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.96■□□□□ 0.95
SRP54P61011 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SRP54P61011 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SRP54P61011 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.96■□□□□ 0.95
SRP54P61011 HLA-L-209ENST00000420110 1011 ntBASIC20.96■□□□□ 0.95
SRP54P61011 CROCCP5-201ENST00000436658 830 ntBASIC20.96■□□□□ 0.95
SRP54P61011 AC006970.2-201ENST00000450065 779 ntBASIC20.96■□□□□ 0.95
SRP54P61011 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.96■□□□□ 0.95
SRP54P61011 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.96■□□□□ 0.95
SRP54P61011 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
SRP54P61011 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.96■□□□□ 0.95
SRP54P61011 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.96■□□□□ 0.95
SRP54P61011 AC053503.5-201ENST00000601508 636 ntBASIC20.96■□□□□ 0.95
SRP54P61011 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.96■□□□□ 0.95
SRP54P61011 MYCNOS-205ENST00000641950 531 ntBASIC20.96■□□□□ 0.95
SRP54P61011 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SRP54P61011 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
SRP54P61011 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SRP54P61011 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SRP54P61011 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.95■□□□□ 0.94
SRP54P61011 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
SRP54P61011 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.95■□□□□ 0.94
SRP54P61011 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SRP54P61011 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SRP54P61011 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SRP54P61011 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SRP54P61011 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.95■□□□□ 0.94
SRP54P61011 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.95■□□□□ 0.94
SRP54P61011 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
SRP54P61011 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.95■□□□□ 0.94
SRP54P61011 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.95■□□□□ 0.94
SRP54P61011 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
SRP54P61011 KRT18P20-201ENST00000548986 1279 ntBASIC20.95■□□□□ 0.94
SRP54P61011 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.95■□□□□ 0.94
SRP54P61011 C1orf229-201ENST00000623686 2258 ntBASIC20.95■□□□□ 0.94
SRP54P61011 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SRP54P61011 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.95■□□□□ 0.94
SRP54P61011 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
SRP54P61011 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SRP54P61011 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SRP54P61011 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SRP54P61011 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.94■□□□□ 0.94
SRP54P61011 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SRP54P61011 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.94■□□□□ 0.94
SRP54P61011 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.94■□□□□ 0.94
SRP54P61011 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
SRP54P61011 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SRP54P61011 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.94■□□□□ 0.94
SRP54P61011 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SRP54P61011 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SRP54P61011 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SRP54P61011 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
SRP54P61011 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
SRP54P61011 C9orf163-202ENST00000624034 2573 ntBASIC20.94■□□□□ 0.94
SRP54P61011 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SRP54P61011 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SRP54P61011 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SRP54P61011 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SRP54P61011 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SRP54P61011 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SRP54P61011 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.93■□□□□ 0.94
SRP54P61011 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.93■□□□□ 0.94
SRP54P61011 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.93■□□□□ 0.94
SRP54P61011 DUX4L16-201ENST00000555130 1264 ntBASIC20.93■□□□□ 0.94
SRP54P61011 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
SRP54P61011 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
SRP54P61011 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SRP54P61011 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SRP54P61011 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SRP54P61011 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SRP54P61011 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
SRP54P61011 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SRP54P61011 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SRP54P61011 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
SRP54P61011 MIR663A-201ENST00000385250 93 ntBASIC20.92■□□□□ 0.94
SRP54P61011 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SRP54P61011 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.92■□□□□ 0.94
SRP54P61011 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.92■□□□□ 0.94
SRP54P61011 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
SRP54P61011 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.92■□□□□ 0.94
SRP54P61011 AC231657.2-201ENST00000624556 255 ntBASIC20.92■□□□□ 0.94
SRP54P61011 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.92■□□□□ 0.94
SRP54P61011 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SRP54P61011 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.92■□□□□ 0.94
SRP54P61011 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms