Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC22.49■■□□□ 1.19
CLCN4P51793 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC22.49■■□□□ 1.19
CLCN4P51793 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CLCN4P51793 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CLCN4P51793 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
CLCN4P51793 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC22.49■■□□□ 1.19
CLCN4P51793 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC22.48■■□□□ 1.19
CLCN4P51793 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC22.48■■□□□ 1.19
CLCN4P51793 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC22.48■■□□□ 1.19
CLCN4P51793 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
CLCN4P51793 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC22.48■■□□□ 1.19
CLCN4P51793 PHB2-213ENST00000546111 858 ntTSL 2 BASIC22.48■■□□□ 1.19
CLCN4P51793 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC22.48■■□□□ 1.19
CLCN4P51793 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CLCN4P51793 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC22.48■■□□□ 1.19
CLCN4P51793 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC22.48■■□□□ 1.19
CLCN4P51793 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CLCN4P51793 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CLCN4P51793 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
CLCN4P51793 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CLCN4P51793 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
CLCN4P51793 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CLCN4P51793 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
CLCN4P51793 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CLCN4P51793 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC22.47■■□□□ 1.19
CLCN4P51793 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC22.47■■□□□ 1.19
CLCN4P51793 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC22.47■■□□□ 1.19
CLCN4P51793 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CLCN4P51793 POU5F1P3-201ENST00000428824 1078 ntBASIC22.47■■□□□ 1.19
CLCN4P51793 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CLCN4P51793 AC093787.1-201ENST00000450396 207 ntBASIC22.47■■□□□ 1.19
CLCN4P51793 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CLCN4P51793 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC22.47■■□□□ 1.19
CLCN4P51793 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CLCN4P51793 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
CLCN4P51793 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CLCN4P51793 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC22.46■■□□□ 1.19
CLCN4P51793 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC22.46■■□□□ 1.19
CLCN4P51793 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC22.46■■□□□ 1.19
CLCN4P51793 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
CLCN4P51793 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
CLCN4P51793 AL512625.2-201ENST00000417533 625 ntBASIC22.46■■□□□ 1.19
CLCN4P51793 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC22.46■■□□□ 1.19
CLCN4P51793 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC22.46■■□□□ 1.19
CLCN4P51793 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC22.46■■□□□ 1.19
CLCN4P51793 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CLCN4P51793 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CLCN4P51793 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CLCN4P51793 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
CLCN4P51793 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
CLCN4P51793 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CLCN4P51793 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC22.45■■□□□ 1.18
CLCN4P51793 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CLCN4P51793 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC22.45■■□□□ 1.18
CLCN4P51793 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.18
CLCN4P51793 RNA5SP413-201ENST00000516373 109 ntBASIC22.45■■□□□ 1.18
CLCN4P51793 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC22.45■■□□□ 1.18
CLCN4P51793 AC069236.1-201ENST00000604339 616 ntBASIC22.45■■□□□ 1.18
CLCN4P51793 AC016405.3-201ENST00000607710 860 ntBASIC22.45■■□□□ 1.18
CLCN4P51793 AC008694.1-202ENST00000636953 945 ntBASIC22.45■■□□□ 1.18
CLCN4P51793 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CLCN4P51793 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CLCN4P51793 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CLCN4P51793 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC22.45■■□□□ 1.18
CLCN4P51793 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CLCN4P51793 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CLCN4P51793 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
CLCN4P51793 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
CLCN4P51793 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
CLCN4P51793 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC22.44■■□□□ 1.18
CLCN4P51793 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CLCN4P51793 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC22.44■■□□□ 1.18
CLCN4P51793 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC22.44■■□□□ 1.18
CLCN4P51793 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC22.44■■□□□ 1.18
CLCN4P51793 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC22.44■■□□□ 1.18
CLCN4P51793 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CLCN4P51793 AC008687.6-201ENST00000596318 630 ntBASIC22.44■■□□□ 1.18
CLCN4P51793 AC092118.2-201ENST00000613495 667 ntBASIC22.44■■□□□ 1.18
CLCN4P51793 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
CLCN4P51793 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC22.43■■□□□ 1.18
CLCN4P51793 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC22.43■■□□□ 1.18
CLCN4P51793 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
CLCN4P51793 AC137767.1-201ENST00000602918 1920 ntBASIC22.43■■□□□ 1.18
CLCN4P51793 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
CLCN4P51793 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC22.43■■□□□ 1.18
CLCN4P51793 RNF146-206ENST00000480444 843 ntTSL 2 BASIC22.43■■□□□ 1.18
CLCN4P51793 AC008175.2-201ENST00000612840 297 ntBASIC22.43■■□□□ 1.18
CLCN4P51793 ITM2C-210ENST00000620962 501 ntBASIC22.43■■□□□ 1.18
CLCN4P51793 AC120498.10-201ENST00000621827 505 ntBASIC22.43■■□□□ 1.18
CLCN4P51793 CASK-201ENST00000378154 2494 ntTSL 5 BASIC22.43■■□□□ 1.18
CLCN4P51793 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CLCN4P51793 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC22.43■■□□□ 1.18
CLCN4P51793 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
CLCN4P51793 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC22.42■■□□□ 1.18
CLCN4P51793 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CLCN4P51793 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
CLCN4P51793 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CLCN4P51793 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CLCN4P51793 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CLCN4P51793 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms