Protein–RNA interactions for Protein: P43308

SSR2, Translocon-associated protein subunit beta, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2P43308 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.3■□□□□ 0.84
SSR2P43308 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SSR2P43308 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.3■□□□□ 0.84
SSR2P43308 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.3■□□□□ 0.84
SSR2P43308 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
SSR2P43308 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SSR2P43308 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SSR2P43308 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.29■□□□□ 0.84
SSR2P43308 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.29■□□□□ 0.84
SSR2P43308 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SSR2P43308 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
SSR2P43308 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SSR2P43308 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.29■□□□□ 0.84
SSR2P43308 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SSR2P43308 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SSR2P43308 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.29■□□□□ 0.84
SSR2P43308 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SSR2P43308 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
SSR2P43308 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
SSR2P43308 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SSR2P43308 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SSR2P43308 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SSR2P43308 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SSR2P43308 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
SSR2P43308 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
SSR2P43308 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SSR2P43308 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.28■□□□□ 0.84
SSR2P43308 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SSR2P43308 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SSR2P43308 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.28■□□□□ 0.84
SSR2P43308 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SSR2P43308 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
SSR2P43308 AC005224.4-201ENST00000583262 1652 ntBASIC20.28■□□□□ 0.84
SSR2P43308 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.28■□□□□ 0.84
SSR2P43308 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
SSR2P43308 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
SSR2P43308 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SSR2P43308 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SSR2P43308 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
SSR2P43308 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.27■□□□□ 0.84
SSR2P43308 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.27■□□□□ 0.84
SSR2P43308 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SSR2P43308 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.27■□□□□ 0.84
SSR2P43308 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SSR2P43308 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.27■□□□□ 0.84
SSR2P43308 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SSR2P43308 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SSR2P43308 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SSR2P43308 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
SSR2P43308 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
SSR2P43308 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
SSR2P43308 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
SSR2P43308 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SSR2P43308 AC003102.1-202ENST00000563394 1796 ntBASIC20.26■□□□□ 0.83
SSR2P43308 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SSR2P43308 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SSR2P43308 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.26■□□□□ 0.83
SSR2P43308 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
SSR2P43308 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SSR2P43308 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.26■□□□□ 0.83
SSR2P43308 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SSR2P43308 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SSR2P43308 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.26■□□□□ 0.83
SSR2P43308 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
SSR2P43308 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.26■□□□□ 0.83
SSR2P43308 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
SSR2P43308 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SSR2P43308 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SSR2P43308 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
SSR2P43308 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SSR2P43308 AC244015.2-201ENST00000616358 1861 ntBASIC20.25■□□□□ 0.83
SSR2P43308 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SSR2P43308 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.25■□□□□ 0.83
SSR2P43308 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SSR2P43308 ZNRF2P3-201ENST00000424200 374 ntBASIC20.25■□□□□ 0.83
SSR2P43308 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SSR2P43308 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.25■□□□□ 0.83
SSR2P43308 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SSR2P43308 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SSR2P43308 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SSR2P43308 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SSR2P43308 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
SSR2P43308 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SSR2P43308 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.24■□□□□ 0.83
SSR2P43308 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SSR2P43308 AC055733.4-201ENST00000638462 1354 ntBASIC20.24■□□□□ 0.83
SSR2P43308 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SSR2P43308 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SSR2P43308 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.24■□□□□ 0.83
SSR2P43308 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
SSR2P43308 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
SSR2P43308 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SSR2P43308 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.24■□□□□ 0.83
SSR2P43308 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
SSR2P43308 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.24■□□□□ 0.83
SSR2P43308 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.24■□□□□ 0.83
SSR2P43308 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SSR2P43308 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.23■□□□□ 0.83
SSR2P43308 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SSR2P43308 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms