Protein–RNA interactions for Protein: P40429

RPL13A, 60S ribosomal protein L13a, humanhuman

Known RBP Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13AP40429 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RPL13AP40429 MED25-214ENST00000622402 642 ntTSL 5 BASIC14.68□□□□□ -0.06
RPL13AP40429 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
RPL13AP40429 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
RPL13AP40429 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
RPL13AP40429 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RPL13AP40429 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RPL13AP40429 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RPL13AP40429 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
RPL13AP40429 HYI-213ENST00000583037 1322 ntTSL 5 BASIC14.67□□□□□ -0.06
RPL13AP40429 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
RPL13AP40429 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC14.67□□□□□ -0.06
RPL13AP40429 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RPL13AP40429 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
RPL13AP40429 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
RPL13AP40429 AC079630.1-202ENST00000618127 1840 ntBASIC14.67□□□□□ -0.06
RPL13AP40429 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RPL13AP40429 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RPL13AP40429 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC14.67□□□□□ -0.06
RPL13AP40429 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RPL13AP40429 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RPL13AP40429 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
RPL13AP40429 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RPL13AP40429 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC14.67□□□□□ -0.06
RPL13AP40429 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC14.67□□□□□ -0.06
RPL13AP40429 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RPL13AP40429 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
RPL13AP40429 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RPL13AP40429 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
RPL13AP40429 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RPL13AP40429 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
RPL13AP40429 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RPL13AP40429 SMPD5-203ENST00000639008 1464 ntBASIC14.66□□□□□ -0.06
RPL13AP40429 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC14.66□□□□□ -0.06
RPL13AP40429 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC14.66□□□□□ -0.06
RPL13AP40429 AC007029.1-201ENST00000604183 313 ntBASIC14.66□□□□□ -0.06
RPL13AP40429 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RPL13AP40429 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RPL13AP40429 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RPL13AP40429 LINC01521-201ENST00000504184 1943 ntBASIC14.66□□□□□ -0.06
RPL13AP40429 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RPL13AP40429 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
RPL13AP40429 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RPL13AP40429 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RPL13AP40429 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RPL13AP40429 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RPL13AP40429 AC080038.3-201ENST00000623346 1952 ntBASIC14.65□□□□□ -0.06
RPL13AP40429 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RPL13AP40429 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
RPL13AP40429 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
RPL13AP40429 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RPL13AP40429 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RPL13AP40429 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
RPL13AP40429 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RPL13AP40429 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC14.65□□□□□ -0.06
RPL13AP40429 AL157400.5-201ENST00000507624 621 ntBASIC14.65□□□□□ -0.06
RPL13AP40429 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RPL13AP40429 MOB2-207ENST00000614710 705 ntTSL 5 BASIC14.65□□□□□ -0.06
RPL13AP40429 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
RPL13AP40429 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
RPL13AP40429 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC14.65□□□□□ -0.06
RPL13AP40429 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.65□□□□□ -0.06
RPL13AP40429 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RPL13AP40429 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RPL13AP40429 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
RPL13AP40429 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RPL13AP40429 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC14.65□□□□□ -0.06
RPL13AP40429 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
RPL13AP40429 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RPL13AP40429 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RPL13AP40429 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC14.64□□□□□ -0.07
RPL13AP40429 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC14.64□□□□□ -0.07
RPL13AP40429 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
RPL13AP40429 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
RPL13AP40429 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RPL13AP40429 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
RPL13AP40429 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RPL13AP40429 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RPL13AP40429 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RPL13AP40429 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
RPL13AP40429 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
RPL13AP40429 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RPL13AP40429 MIR3960-201ENST00000583311 91 ntBASIC14.64□□□□□ -0.07
RPL13AP40429 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RPL13AP40429 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
RPL13AP40429 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC14.64□□□□□ -0.07
RPL13AP40429 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
RPL13AP40429 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RPL13AP40429 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RPL13AP40429 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RPL13AP40429 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RPL13AP40429 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
RPL13AP40429 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RPL13AP40429 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RPL13AP40429 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RPL13AP40429 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RPL13AP40429 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RPL13AP40429 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
RPL13AP40429 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RPL13AP40429 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms