Protein–RNA interactions for Protein: P33240

CSTF2, Cleavage stimulation factor subunit 2, humanhuman

Known RBP eCLIP

Length 577 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2P33240 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.03□□□□□ -1.64e-8■■■□□ 17.3
CSTF2P33240 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5□□□□□ -1.614e-8■■■□□ 17.3
CSTF2P33240 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.43□□□□□ -1.74e-8■■■□□ 17.3
CSTF2P33240 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.01□□□□□ -1.774e-8■■■□□ 17.3
CSTF2P33240 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.774e-8■■■□□ 17.3
CSTF2P33240 ERRFI1-205ENST00000487559 787 ntTSL 222.31■■□□□ 1.162e-7■■■□□ 17.3
CSTF2P33240 PCF11-207ENST00000624931 1720 nt16.67■□□□□ 0.262e-7■■■□□ 17.3
CSTF2P33240 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC22.31■■□□□ 1.161e-6■■■□□ 17.2
CSTF2P33240 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC12.86□□□□□ -0.358e-8■■■□□ 17.2
CSTF2P33240 MTSS1-205ENST00000518547 4944 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.668e-8■■■□□ 17.2
CSTF2P33240 MTSS1-202ENST00000378017 4458 ntTSL 1 (best) BASIC9.97□□□□□ -0.818e-8■■■□□ 17.2
CSTF2P33240 MTSS1-212ENST00000522162 553 ntTSL 46.08□□□□□ -1.448e-8■■■□□ 17.2
CSTF2P33240 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC26.71■■□□□ 1.874e-6■■■□□ 17.2
CSTF2P33240 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC25.87■■□□□ 1.734e-6■■■□□ 17.2
CSTF2P33240 AGPS-202ENST00000409888 815 ntTSL 4 BASIC25.35■■□□□ 1.654e-6■■■□□ 17.2
CSTF2P33240 LMBR1-209ENST00000434453 2229 ntTSL 523.52■■□□□ 1.364e-6■■■□□ 17.2
CSTF2P33240 LMBR1-214ENST00000461469 560 ntTSL 323.13■■□□□ 1.294e-6■■■□□ 17.2
CSTF2P33240 LMBR1-211ENST00000444719 762 ntTSL 321.89■■□□□ 1.094e-6■■■□□ 17.2
CSTF2P33240 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.944e-6■■■□□ 17.2
CSTF2P33240 LMBR1-205ENST00000430278 523 ntTSL 420.56■□□□□ 0.884e-6■■■□□ 17.2
CSTF2P33240 LMBR1-207ENST00000433968 578 ntTSL 420.56■□□□□ 0.884e-6■■■□□ 17.2
CSTF2P33240 LMBR1-210ENST00000434503 930 ntTSL 520.56■□□□□ 0.884e-6■■■□□ 17.2
CSTF2P33240 LMBR1-203ENST00000414218 451 ntTSL 520.36■□□□□ 0.854e-6■■■□□ 17.2
CSTF2P33240 LMBR1-219ENST00000498034 478 ntTSL 320.09■□□□□ 0.814e-6■■■□□ 17.2
CSTF2P33240 LMBR1-208ENST00000434278 678 ntTSL 519.85■□□□□ 0.774e-6■■■□□ 17.2
CSTF2P33240 LMBR1-213ENST00000454132 2922 ntTSL 218.73■□□□□ 0.594e-6■■■□□ 17.2
CSTF2P33240 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.462e-11■■■□□ 17.2
CSTF2P33240 UBC-210ENST00000541645 548 ntTSL 217.41■□□□□ 0.384e-6■■■□□ 17.2
CSTF2P33240 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.344e-6■■■□□ 17.2
CSTF2P33240 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.284e-6■■■□□ 17.2
CSTF2P33240 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.94■□□□□ 0.144e-6■■■□□ 17.2
CSTF2P33240 MEMO1-205ENST00000413686 769 ntTSL 315.77■□□□□ 0.124e-6■■■□□ 17.2
CSTF2P33240 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.73■□□□□ 0.114e-6■■■□□ 17.2
CSTF2P33240 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.14e-6■■■□□ 17.2
CSTF2P33240 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.61■□□□□ 0.094e-6■■■□□ 17.2
CSTF2P33240 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.074e-6■■■□□ 17.2
CSTF2P33240 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.34■□□□□ 0.054e-6■■■□□ 17.2
CSTF2P33240 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.044e-6■■■□□ 17.2
CSTF2P33240 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.114e-6■■■□□ 17.2
CSTF2P33240 MEMO1-209ENST00000490459 1242 ntTSL 214.15□□□□□ -0.144e-6■■■□□ 17.2
CSTF2P33240 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.174e-6■■■□□ 17.2
CSTF2P33240 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC13.82□□□□□ -0.24e-6■■■□□ 17.2
CSTF2P33240 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.264e-6■■■□□ 17.2
CSTF2P33240 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.314e-6■■■□□ 17.2
CSTF2P33240 UBC-207ENST00000540351 622 ntTSL 1 (best)12.89□□□□□ -0.354e-6■■■□□ 17.2
CSTF2P33240 UBC-212ENST00000544481 477 ntTSL 412.76□□□□□ -0.374e-6■■■□□ 17.2
CSTF2P33240 KBTBD2-207ENST00000485611 537 ntTSL 412.72□□□□□ -0.372e-11■■■□□ 17.2
CSTF2P33240 WDR27-202ENST00000441385 683 ntTSL 312.45□□□□□ -0.424e-6■■■□□ 17.2
CSTF2P33240 UBC-202ENST00000535131 563 ntTSL 512.37□□□□□ -0.434e-6■■■□□ 17.2
CSTF2P33240 SCP2-203ENST00000371514 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.444e-6■■■□□ 17.2
CSTF2P33240 MID1IP1-204ENST00000614558 3781 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.444e-6■■■□□ 17.2
CSTF2P33240 WDR27-203ENST00000448612 3178 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.474e-6■■■□□ 17.2
CSTF2P33240 UBC-209ENST00000541272 582 ntTSL 511.8□□□□□ -0.524e-6■■■□□ 17.2
CSTF2P33240 SCP2-210ENST00000478631 5204 ntTSL 211.69□□□□□ -0.544e-6■■■□□ 17.2
CSTF2P33240 MEMO1-207ENST00000426310 1336 ntTSL 2 BASIC11.61□□□□□ -0.554e-6■■■□□ 17.2
CSTF2P33240 WDR27-211ENST00000546525 3511 ntTSL 1 (best)11.57□□□□□ -0.564e-6■■■□□ 17.2
CSTF2P33240 SPRED2-208ENST00000474228 876 ntTSL 39.99□□□□□ -0.814e-6■■■□□ 17.2
CSTF2P33240 WDR27-205ENST00000467418 947 ntTSL 59.91□□□□□ -0.824e-6■■■□□ 17.2
CSTF2P33240 SPRED2-203ENST00000426832 498 ntTSL 39.67□□□□□ -0.864e-6■■■□□ 17.2
CSTF2P33240 MEMO1-203ENST00000404530 1482 ntAPPRIS P1 TSL 2 BASIC8.47□□□□□ -1.054e-6■■■□□ 17.2
CSTF2P33240 AC006153.1-201ENST00000480135 371 ntTSL 3 BASIC8.27□□□□□ -1.094e-6■■■□□ 17.2
CSTF2P33240 GLRX-201ENST00000237858 1211 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.094e-6■■■□□ 17.2
CSTF2P33240 GLRX-202ENST00000379979 1366 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.124e-6■■■□□ 17.2
CSTF2P33240 RPL7L1-208ENST00000493763 4476 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.134e-6■■■□□ 17.2
CSTF2P33240 CLDN12-201ENST00000287916 3565 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.184e-6■■■□□ 17.2
CSTF2P33240 GLRX-205ENST00000507605 1734 ntTSL 27.2□□□□□ -1.264e-6■■■□□ 17.2
CSTF2P33240 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.366e-6■■■□□ 17.2
CSTF2P33240 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.374e-6■■■□□ 17.2
CSTF2P33240 LMBR1-204ENST00000415428 3457 ntTSL 1 (best)6.08□□□□□ -1.444e-6■■■□□ 17.2
CSTF2P33240 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.474e-6■■■□□ 17.2
CSTF2P33240 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.27□□□□□ -1.574e-6■■■□□ 17.2
CSTF2P33240 AGPS-204ENST00000637633 2143 ntTSL 55.2□□□□□ -1.584e-6■■■□□ 17.2
CSTF2P33240 CLDN12-214ENST00000498033 420 ntTSL 35.09□□□□□ -1.594e-6■■■□□ 17.2
CSTF2P33240 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.656e-6■■■□□ 17.2
CSTF2P33240 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.5□□□□□ -1.694e-6■■■□□ 17.2
CSTF2P33240 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.07□□□□□ -1.766e-6■■■□□ 17.2
CSTF2P33240 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.94□□□□□ -1.782e-11■■■□□ 17.2
CSTF2P33240 CLDN12-210ENST00000483862 338 ntTSL 23.45□□□□□ -1.864e-6■■■□□ 17.2
CSTF2P33240 CLDN12-206ENST00000451941 527 ntTSL 33.39□□□□□ -1.874e-6■■■□□ 17.2
CSTF2P33240 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.07□□□□□ -1.924e-6■■■□□ 17.2
CSTF2P33240 MEMO1-206ENST00000422936 327 ntTSL 52.49□□□□□ -2.014e-6■■■□□ 17.2
CSTF2P33240 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.268e-7■■■□□ 17.2
CSTF2P33240 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC23.45■■□□□ 1.358e-6■■■□□ 17.2
CSTF2P33240 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.52■□□□□ 0.48e-6■■■□□ 17.2
CSTF2P33240 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.298e-6■■■□□ 17.2
CSTF2P33240 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.92□□□□□ -0.188e-6■■■□□ 17.2
CSTF2P33240 LINC01138-209ENST00000639181 1534 ntTSL 5 BASIC10.82□□□□□ -0.688e-6■■■□□ 17.2
CSTF2P33240 ASCC3-204ENST00000369162 8146 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.78e-6■■■□□ 17.2
CSTF2P33240 LINC01138-210ENST00000640832 1709 ntTSL 5 BASIC9.79□□□□□ -0.848e-6■■■□□ 17.2
CSTF2P33240 XRN2-201ENST00000377191 3437 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.988e-6■■■□□ 17.2
CSTF2P33240 RHOBTB1-202ENST00000357917 4339 ntAPPRIS P1 TSL 2 BASIC8.86□□□□□ -0.998e-6■■■□□ 17.2
CSTF2P33240 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.5□□□□□ -1.378e-6■■■□□ 17.2
CSTF2P33240 KANSL1L-204ENST00000428655 1510 ntTSL 1 (best)5.9□□□□□ -1.468e-6■■■□□ 17.2
CSTF2P33240 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.99□□□□□ -1.618e-6■■■□□ 17.2
CSTF2P33240 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.76□□□□□ -1.658e-6■■■□□ 17.2
CSTF2P33240 KANSL1L-210ENST00000460256 372 ntTSL 31.5□□□□□ -2.178e-6■■■□□ 17.2
CSTF2P33240 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.96■□□□□ 0.955e-9■■■□□ 17.2
CSTF2P33240 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.056e-6■■■□□ 17.1
CSTF2P33240 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.17□□□□□ -0.145e-6■■■□□ 17.1
CSTF2P33240 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.42□□□□□ -0.265e-6■■■□□ 17.1
Retrieved 100 of 6,735 protein–RNA pairs in 38.4 ms