RNA–Protein interactions for RNA: ENST00000639159.1

LINC01138-208, Transcript of long intergenic non-protein coding RNA 1138, humanhuman

TSL 5 BASIC

Gene LINC01138, Length 1,521 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01138-208ENST00000639159 NISCHQ9Y2I1 1504 aa12.65□□□□□ -0.39
LINC01138-208ENST00000639159 AEBP2Q6ZN18 517 aaPredicted RBP12.35□□□□□ -0.43
LINC01138-208ENST00000639159 CHIC1Q5VXU3 224 aa11.51□□□□□ -0.57
LINC01138-208ENST00000639159 HRCP23327 699 aa11.22□□□□□ -0.61
LINC01138-208ENST00000639159 PELP1Q8IZL8 1130 aaKnown RBP11.14□□□□□ -0.63
LINC01138-208ENST00000639159 DCAF1Q9Y4B6 1507 aa10.91□□□□□ -0.66
LINC01138-208ENST00000639159 MYT1Q01538 1121 aa10.83□□□□□ -0.68
LINC01138-208ENST00000639159 MYO15BQ96JP2 1530 aa10.82□□□□□ -0.68
LINC01138-208ENST00000639159 ZCCHC6Q5VYS8 1495 aaKnown RBP10.81□□□□□ -0.68
LINC01138-208ENST00000639159 CCDC180Q9P1Z9 1646 aa10.8□□□□□ -0.68
LINC01138-208ENST00000639159 SHROOM4Q9ULL8 1493 aa10.79□□□□□ -0.68
LINC01138-208ENST00000639159 SUPT5HO00267 1087 aaKnown RBP10.79□□□□□ -0.68
LINC01138-208ENST00000639159 PCGF6Q9BYE7 350 aa10.79□□□□□ -0.68
LINC01138-208ENST00000639159 ZEB1P37275 1124 aaPredicted RBP10.74□□□□□ -0.69
LINC01138-208ENST00000639159 PPARGC1BQ86YN6 1023 aaKnown RBP10.67□□□□□ -0.7
LINC01138-208ENST00000639159 TRIM26Q12899 539 aaPredicted RBP10.65□□□□□ -0.7
LINC01138-208ENST00000639159 SENP3Q9H4L4 574 aaPredicted RBP10.59□□□□□ -0.71
LINC01138-208ENST00000639159 SCAF1Q9H7N4 1312 aaKnown RBP10.49□□□□□ -0.73
LINC01138-208ENST00000639159 PHF23Q9BUL5 403 aaPredicted RBP10.38□□□□□ -0.75
LINC01138-208ENST00000639159 ACIN1Q9UKV3 1341 aaKnown RBP10.35□□□□□ -0.75
LINC01138-208ENST00000639159 LOC105371045A0A1W2PR82 267 aa10.34□□□□□ -0.75
LINC01138-208ENST00000639159 CENPBP07199 599 aaPredicted RBP10.33□□□□□ -0.76
LINC01138-208ENST00000639159 ABCC9O60706 1549 aa10.31□□□□□ -0.76
LINC01138-208ENST00000639159 TTBK1Q5TCY1 1321 aaPredicted RBP10.22□□□□□ -0.77
LINC01138-208ENST00000639159 NEUROD1Q13562 356 aa10.18□□□□□ -0.78
LINC01138-208ENST00000639159 GTF3C3Q9Y5Q9 886 aa10.17□□□□□ -0.78
LINC01138-208ENST00000639159 RB1CC1Q8TDY2 1594 aa10.17□□□□□ -0.78
LINC01138-208ENST00000639159 TRIM41Q8WV44 630 aa10.13□□□□□ -0.79
LINC01138-208ENST00000639159 DIEXFQ68CQ4 756 aaKnown RBP10.12□□□□□ -0.79
LINC01138-208ENST00000639159 RSF1Q96T23 1441 aaPredicted RBP10.1□□□□□ -0.79
LINC01138-208ENST00000639159 CLSPNQ9HAW4 1339 aa10.1□□□□□ -0.79
LINC01138-208ENST00000639159 CCER1Q8TC90 406 aaPredicted RBP10.07□□□□□ -0.8
LINC01138-208ENST00000639159 POTEDQ86YR6 584 aa10.07□□□□□ -0.8
LINC01138-208ENST00000639159 DCAF8L2P0C7V8 631 aa10.06□□□□□ -0.8
LINC01138-208ENST00000639159 WRNQ14191 1432 aaPredicted RBP eCLIP10.05□□□□□ -0.8
LINC01138-208ENST00000639159 ZNF316A6NFI3 1004 aaPredicted RBP9.97□□□□□ -0.81
LINC01138-208ENST00000639159 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.97□□□□□ -0.81
LINC01138-208ENST00000639159 FOXD1Q16676 465 aa9.94□□□□□ -0.82
LINC01138-208ENST00000639159 EIF4G1Q04637 1599 aaKnown RBP9.91□□□□□ -0.82
LINC01138-208ENST00000639159 FAM9AQ8IZU1 332 aaPredicted RBP9.9□□□□□ -0.82
LINC01138-208ENST00000639159 SCRIBQ14160 1630 aa9.89□□□□□ -0.83
LINC01138-208ENST00000639159 EEA1Q15075 1411 aa9.88□□□□□ -0.83
LINC01138-208ENST00000639159 BAZ1AQ9NRL2 1556 aaPredicted RBP9.86□□□□□ -0.83
LINC01138-208ENST00000639159 TNIKQ9UKE5 1360 aa9.85□□□□□ -0.83
LINC01138-208ENST00000639159 CEP162Q5TB80 1403 aa9.84□□□□□ -0.83
LINC01138-208ENST00000639159 ANP32EQ9BTT0 268 aa9.81□□□□□ -0.84
LINC01138-208ENST00000639159 MIER1Q8N108 512 aa9.77□□□□□ -0.84
LINC01138-208ENST00000639159 YTHDC1Q96MU7 727 aaKnown RBP9.77□□□□□ -0.84
LINC01138-208ENST00000639159 NACADO15069 1562 aa9.77□□□□□ -0.85
LINC01138-208ENST00000639159 MROH2BQ7Z745 1585 aa9.77□□□□□ -0.85
LINC01138-208ENST00000639159 WIZO95785 1651 aa9.74□□□□□ -0.85
LINC01138-208ENST00000639159 GOLGA3Q08378 1498 aa9.73□□□□□ -0.85
LINC01138-208ENST00000639159 SUPT16HQ9Y5B9 1047 aaKnown RBP9.73□□□□□ -0.85
LINC01138-208ENST00000639159 TOP2AP11388 1531 aaKnown RBP9.72□□□□□ -0.85
LINC01138-208ENST00000639159 BCL11AQ9H165 835 aa9.72□□□□□ -0.85
LINC01138-208ENST00000639159 CECR2Q9BXF3 1484 aa9.7□□□□□ -0.86
LINC01138-208ENST00000639159 KIF21BO75037 1637 aa9.69□□□□□ -0.86
LINC01138-208ENST00000639159 EHMT2Q96KQ7 1210 aa9.68□□□□□ -0.86
LINC01138-208ENST00000639159 TSHZ2Q9NRE2 1034 aa9.67□□□□□ -0.86
LINC01138-208ENST00000639159 CCDC88BA6NC98 1476 aa9.66□□□□□ -0.86
LINC01138-208ENST00000639159 CEP164Q9UPV0 1460 aa9.66□□□□□ -0.86
LINC01138-208ENST00000639159 BAZ1BQ9UIG0 1483 aaKnown RBP9.65□□□□□ -0.86
LINC01138-208ENST00000639159 VPS8Q8N3P4 1428 aa9.64□□□□□ -0.87
LINC01138-208ENST00000639159 CSRNP3Q8WYN3 585 aa9.63□□□□□ -0.87
LINC01138-208ENST00000639159 ABCC8Q09428 1581 aa9.63□□□□□ -0.87
LINC01138-208ENST00000639159 SMARCA2P51531 1590 aa9.62□□□□□ -0.87
LINC01138-208ENST00000639159 SOGA1O94964 1423 aa9.6□□□□□ -0.87
LINC01138-208ENST00000639159 MYT1LQ9UL68 1186 aa9.59□□□□□ -0.87
LINC01138-208ENST00000639159 CLIP1P30622 1438 aa9.58□□□□□ -0.88
LINC01138-208ENST00000639159 SMARCA4P51532 1647 aa9.57□□□□□ -0.88
LINC01138-208ENST00000639159 CUX2O14529 1486 aa9.57□□□□□ -0.88
LINC01138-208ENST00000639159 UBTFP17480 764 aaKnown RBP9.56□□□□□ -0.88
LINC01138-208ENST00000639159 PLPPR3Q6T4P5 718 aa9.56□□□□□ -0.88
LINC01138-208ENST00000639159 DHX57Q6P158 1386 aaKnown RBP9.55□□□□□ -0.88
LINC01138-208ENST00000639159 APLP2Q06481 763 aa9.55□□□□□ -0.88
LINC01138-208ENST00000639159 HNRNPUL2Q1KMD3 747 aaKnown RBP9.53□□□□□ -0.88
LINC01138-208ENST00000639159 NEFLP07196 543 aa9.51□□□□□ -0.89
LINC01138-208ENST00000639159 RRBP1Q9P2E9 1410 aaKnown RBP9.49□□□□□ -0.89
LINC01138-208ENST00000639159 RUSC2Q8N2Y8 1516 aa9.48□□□□□ -0.89
LINC01138-208ENST00000639159 MSH5O43196 834 aa9.47□□□□□ -0.89
LINC01138-208ENST00000639159 ERICH3Q5RHP9 1530 aa9.47□□□□□ -0.89
LINC01138-208ENST00000639159 FANCIQ9NVI1 1328 aa9.47□□□□□ -0.89
LINC01138-208ENST00000639159 RBM19Q9Y4C8 960 aaKnown RBP9.46□□□□□ -0.9
LINC01138-208ENST00000639159 PEG3Q9GZU2 1588 aa9.44□□□□□ -0.9
LINC01138-208ENST00000639159 CCER2I3L3R5 266 aa9.43□□□□□ -0.9
LINC01138-208ENST00000639159 ERICH6Q7L0X2 663 aa9.43□□□□□ -0.9
LINC01138-208ENST00000639159 FKBP8Q14318 412 aa9.42□□□□□ -0.9
LINC01138-208ENST00000639159 SYNJ1O43426 1573 aa9.42□□□□□ -0.9
LINC01138-208ENST00000639159 TIMELESSQ9UNS1 1208 aa9.41□□□□□ -0.9
LINC01138-208ENST00000639159 ERICH6BQ5W0A0 696 aa9.41□□□□□ -0.9
LINC01138-208ENST00000639159 RAPGEF2Q9Y4G8 1499 aa9.39□□□□□ -0.91
LINC01138-208ENST00000639159 MAP3K1Q13233 1512 aa9.38□□□□□ -0.91
LINC01138-208ENST00000639159 ARAP1Q96P48 1450 aa9.37□□□□□ -0.91
LINC01138-208ENST00000639159 CCNB3Q8WWL7 1395 aa9.37□□□□□ -0.91
LINC01138-208ENST00000639159 TOP2BQ02880 1626 aa9.36□□□□□ -0.91
LINC01138-208ENST00000639159 BIVM-ERCC5R4GMW8 1640 aa9.35□□□□□ -0.91
LINC01138-208ENST00000639159 MAPKBP1O60336 1514 aa9.35□□□□□ -0.91
LINC01138-208ENST00000639159 CDK11AQ9UQ88 783 aaPredicted RBP9.34□□□□□ -0.91
LINC01138-208ENST00000639159 PRXQ9BXM0 1461 aa9.34□□□□□ -0.91
LINC01138-208ENST00000639159 BCANQ96GW7 911 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms