Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
CCND1P24385 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.3■■□□□ 1
CCND1P24385 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
CCND1P24385 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.3■■□□□ 1
CCND1P24385 AC136469.2-201ENST00000623944 1028 ntBASIC21.3■■□□□ 1
CCND1P24385 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
CCND1P24385 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CCND1P24385 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCND1P24385 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.29■■□□□ 1
CCND1P24385 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.29■■□□□ 1
CCND1P24385 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCND1P24385 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.29■■□□□ 1
CCND1P24385 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
CCND1P24385 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCND1P24385 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.29■■□□□ 1
CCND1P24385 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.29■■□□□ 1
CCND1P24385 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.29■■□□□ 1
CCND1P24385 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.28■■□□□ 1
CCND1P24385 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.28■■□□□ 1
CCND1P24385 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.28■■□□□ 1
CCND1P24385 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.28■■□□□ 1
CCND1P24385 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCND1P24385 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.28■■□□□ 1
CCND1P24385 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.28■■□□□ 1
CCND1P24385 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCND1P24385 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.28■■□□□ 1
CCND1P24385 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.28■■□□□ 1
CCND1P24385 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.28■■□□□ 1
CCND1P24385 OR2I1P-207ENST00000453522 948 ntBASIC21.28■■□□□ 1
CCND1P24385 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.28■■□□□ 1
CCND1P24385 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CCND1P24385 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
CCND1P24385 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
CCND1P24385 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCND1P24385 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CCND1P24385 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
CCND1P24385 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.27■■□□□ 1
CCND1P24385 AF106564.1-201ENST00000607058 2553 ntBASIC21.27■■□□□ 1
CCND1P24385 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CCND1P24385 LINC01960-201ENST00000563759 1884 ntBASIC21.27■■□□□ 1
CCND1P24385 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCND1P24385 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.27■■□□□ 1
CCND1P24385 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.27■■□□□ 1
CCND1P24385 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CCND1P24385 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.27■■□□□ 1
CCND1P24385 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCND1P24385 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.27■■□□□ 1
CCND1P24385 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.27■■□□□ 1
CCND1P24385 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.27■■□□□ 1
CCND1P24385 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CCND1P24385 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC21.27■□□□□ 0.99
CCND1P24385 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCND1P24385 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCND1P24385 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCND1P24385 UNC93B3-201ENST00000308076 687 ntBASIC21.26■□□□□ 0.99
CCND1P24385 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CCND1P24385 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
CCND1P24385 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.26■□□□□ 0.99
CCND1P24385 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCND1P24385 AC068587.7-201ENST00000641602 218 ntBASIC21.26■□□□□ 0.99
CCND1P24385 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCND1P24385 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CCND1P24385 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CCND1P24385 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.25■□□□□ 0.99
CCND1P24385 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
CCND1P24385 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
CCND1P24385 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCND1P24385 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCND1P24385 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCND1P24385 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.25■□□□□ 0.99
CCND1P24385 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCND1P24385 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CCND1P24385 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CCND1P24385 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.25■□□□□ 0.99
CCND1P24385 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.25■□□□□ 0.99
CCND1P24385 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCND1P24385 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.24■□□□□ 0.99
CCND1P24385 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CCND1P24385 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
CCND1P24385 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCND1P24385 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCND1P24385 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CCND1P24385 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.24■□□□□ 0.99
CCND1P24385 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CCND1P24385 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CCND1P24385 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.24■□□□□ 0.99
CCND1P24385 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CCND1P24385 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCND1P24385 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CCND1P24385 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.24■□□□□ 0.99
CCND1P24385 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCND1P24385 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCND1P24385 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.23■□□□□ 0.99
CCND1P24385 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CCND1P24385 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
CCND1P24385 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.23■□□□□ 0.99
CCND1P24385 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.23■□□□□ 0.99
CCND1P24385 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.23■□□□□ 0.99
CCND1P24385 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.23■□□□□ 0.99
CCND1P24385 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms